Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036143 through 18771 annotations produced 1 hits



(CG14142):

Annotation Number : CG14142
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036143
Gbrowse : chr3L:11166674-11168935 (+) // 100.0 //
Probeset : 1637514_at
Accessions : protein= NP_001163415; /// NP_001163416; /// NP_648447;, nucleotide= NM_001169944; /// NM_001169945; /// NM_140190;
FlyMine data for FBgn0036143.
VDRC has 2 RNAi stocks for FBgn0036143 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain8 02 of 4 2.20Up
Head29 44 of 4 7.50Up
Eye2 11 of 4 0.66None
Thoracicoabdominal ganglion6 02 of 4 1.60None
Salivary gland52 34 of 413.66Up
Crop4 00 of 4 1.10None
Midgut3 10 of 4 0.80None
Tubule3 00 of 4 0.90None
Hindgut2 00 of 4 0.60None
Heart2 00 of 4 0.66None
Fat body3 20 of 4 0.82None
Ovary1 00 of 4 0.30None
Testis4 11 of 4 1.20None
Male accessory glands7 21 of 4 2.00None
Virgin spermatheca0 00 of 4 0.13None
Mated spermatheca1 00 of 4 0.41None
Adult carcass5 20 of 4 1.40None
Larval CNS2 10 of 4 0.59None
Larval Salivary gland0 00 of 4 0.22None
Larval midgut3 10 of 4 0.86None
Larval tubule4 10 of 4 1.20None
Larval hindgut1 00 of 4 0.50None
Larval fat body4 10 of 4 1.30None
Larval trachea3 20 of 4 0.81None
Larval carcass3 00 of 4 0.92None
S2 cells (growing)1 10 of 4 0.47None
Whole fly3 11 of 4

Looking for FBgn0036143. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime