FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036144 through 18771 annotations produced 1 hits

GlcAT-P (GlcAT-P):

Annotation Number : CG6207
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036144
Gbrowse : chr3L:11170047-11190603 (-) // 100.0 //
Probeset : 1624164_s_at
Accessions : protein= NP_001014581; /// NP_648448; /// NP_729685;, nucleotide= NM_001014581; /// NM_140191; /// NM_168451;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : "0015018 // galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity // inferred from direct assay ///
FlyMine data for FBgn0036144.
BDGP gene expression has embryonic in situ data for CG6207: 25 pix of staining in 14 body parts.
VDRC has 1 RNAi stocks for FBgn0036144 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	463 ± 32	4 of 4	8.40	Up
Head	129 ± 14	4 of 4	2.30	Up
Eye	8 ± 1	2 of 4	0.15	Down
Thoracicoabdominal ganglion	485 ± 13	4 of 4	8.80	Up
Salivary gland	1296 ± 108	4 of 4	23.49	Up
Crop	26 ± 3	4 of 4	0.50	Down
Midgut	45 ± 2	4 of 4	0.80	None
Tubule	4 ± 0	0 of 4	0.10	Down
Hindgut	177 ± 10	4 of 4	3.20	Up
Heart	42 ± 2	4 of 4	0.78	None
Fat body	12 ± 3	2 of 4	0.22	Down
Ovary	87 ± 4	4 of 4	1.60	Up
Testis	10 ± 0	4 of 4	0.20	Down
Male accessory glands	211 ± 7	4 of 4	3.80	Up
Virgin spermatheca	125 ± 11	4 of 4	2.27	Up
Mated spermatheca	114 ± 9	4 of 4	2.08	Up
Adult carcass	35 ± 3	4 of 4	0.60	Down
Larval CNS	88 ± 19	4 of 4	1.61	Up
Larval Salivary gland	156 ± 36	4 of 4	2.83	None
Larval midgut	46 ± 4	4 of 4	0.83	None
Larval tubule	13 ± 2	4 of 4	0.20	Down
Larval hindgut	129 ± 1	4 of 4	2.35	Up
Larval fat body	18 ± 3	4 of 4	0.30	Down
Larval trachea	7 ± 1	3 of 4	0.13	Down
Larval carcass	35 ± 2	4 of 4	0.64	Down
S2 cells (growing)	227 ± 18	4 of 4	4.11	Up
Whole fly	55 ± 4	4 of 4

Looking for FBgn0036144. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720