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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036144 through 18771 annotations produced 1 hits



GlcAT-P (GlcAT-P):

Annotation Number : CG6207
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036144
Gbrowse : chr3L:11170047-11190603 (-) // 100.0 //
Probeset : 1624164_s_at
Accessions : protein= NP_001014581; /// NP_648448; /// NP_729685;, nucleotide= NM_001014581; /// NM_140191; /// NM_168451;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : "0015018 // galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity // inferred from direct assay ///
FlyMine data for FBgn0036144.
BDGP gene expression has embryonic in situ data for CG6207: 25 pix of staining in 14 body parts.
VDRC has 1 RNAi stocks for FBgn0036144 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain463 324 of 4 8.40Up
Head129 144 of 4 2.30Up
Eye8 12 of 4 0.15Down
Thoracicoabdominal ganglion485 134 of 4 8.80Up
Salivary gland1296 1084 of 423.49Up
Crop26 34 of 4 0.50Down
Midgut45 24 of 4 0.80None
Tubule4 00 of 4 0.10Down
Hindgut177 104 of 4 3.20Up
Heart42 24 of 4 0.78None
Fat body12 32 of 4 0.22Down
Ovary87 44 of 4 1.60Up
Testis10 04 of 4 0.20Down
Male accessory glands211 74 of 4 3.80Up
Virgin spermatheca125 114 of 4 2.27Up
Mated spermatheca114 94 of 4 2.08Up
Adult carcass35 34 of 4 0.60Down
Larval CNS88 194 of 4 1.61Up
Larval Salivary gland156 364 of 4 2.83None
Larval midgut46 44 of 4 0.83None
Larval tubule13 24 of 4 0.20Down
Larval hindgut129 14 of 4 2.35Up
Larval fat body18 34 of 4 0.30Down
Larval trachea7 13 of 4 0.13Down
Larval carcass35 24 of 4 0.64Down
S2 cells (growing)227 184 of 4 4.11Up
Whole fly55 44 of 4

Looking for FBgn0036144. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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