FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036152 through 18771 annotations produced 1 hits

(CG6175):

Annotation Number : CG6175
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036152
Gbrowse : chr3L:11281021-11287887 (-) // 100.0 //
Probeset : 1638873_at
Accessions : protein= NP_648457;, nucleotide= NM_140200;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036152.
BDGP gene expression has embryonic in situ data for CG6175: 4 pix of staining in 1 body parts.
BioGrid reports that CG6175 interacts with CG8079 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 2	4 of 4	0.40	Down
Head	31 ± 4	4 of 4	0.90	None
Eye	19 ± 2	4 of 4	0.55	Down
Thoracicoabdominal ganglion	12 ± 0	4 of 4	0.30	Down
Salivary gland	38 ± 9	4 of 4	1.12	None
Crop	45 ± 4	4 of 4	1.30	None
Midgut	27 ± 4	4 of 4	0.80	None
Tubule	36 ± 1	4 of 4	1.10	None
Hindgut	39 ± 4	4 of 4	1.10	None
Heart	10 ± 1	4 of 4	0.31	Down
Fat body	74 ± 9	4 of 4	2.17	Up
Ovary	92 ± 5	4 of 4	2.70	Up
Testis	6 ± 0	4 of 4	0.20	Down
Male accessory glands	67 ± 6	4 of 4	1.90	Up
Virgin spermatheca	58 ± 12	4 of 4	1.68	None
Mated spermatheca	44 ± 5	4 of 4	1.27	None
Adult carcass	26 ± 2	4 of 4	0.80	None
Larval CNS	7 ± 1	4 of 4	0.22	Down
Larval Salivary gland	31 ± 4	4 of 4	0.90	None
Larval midgut	30 ± 2	4 of 4	0.87	None
Larval tubule	27 ± 1	4 of 4	0.80	None
Larval hindgut	44 ± 3	4 of 4	1.28	None
Larval fat body	16 ± 3	4 of 4	0.50	Down
Larval trachea	18 ± 4	4 of 4	0.52	Down
Larval carcass	31 ± 2	4 of 4	0.91	None
S2 cells (growing)	16 ± 1	4 of 4	0.46	Down
Whole fly	34 ± 2	4 of 4

Looking for FBgn0036152. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720