Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036160 through 18771 annotations produced 1 hits



(CG12289):

Annotation Number : CG12289
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036160
Gbrowse : chr3L:11450180-11451570 (-) // 100.0 //
Probeset : 1627189_a_at
Accessions : protein= NP_648465;, nucleotide= NM_140208;
Interpro : 0004454 // ketohexokinase activity // inferred from sequence or structural similarity /// 0004454 // ketohexokinase acti
FlyMine data for FBgn0036160.
BDGP gene expression has embryonic in situ data for CG12289: 8 pix of staining in 1 body parts.
Homophila reports that CG12289 is a close match (4e-31) to human gene KHK (NP_006479), a gene associated with [Fructosuria] (3).
BioGrid reports that CG12289 interacts with CG16758 CG7335 CG8458 .
VDRC has 3 RNAi stocks for FBgn0036160 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.00Down
Head1 ± 00 of 4 0.00Down
Eye1 ± 00 of 4 0.05Down
Thoracicoabdominal ganglion0 ± 00 of 4 0.00Down
Salivary gland5 ± 30 of 4 0.16Down
Crop2 ± 10 of 4 0.10Down
Midgut7 ± 20 of 4 0.20Down
Tubule3 ± 00 of 4 0.10Down
Hindgut2 ± 00 of 4 0.10Down
Heart1 ± 00 of 4 0.05Down
Fat body1 ± 00 of 4 0.06Down
Ovary0 ± 00 of 4 0.00Down
Testis360 ± 244 of 411.50Up
Male accessory glands2 ± 00 of 4 0.10Down
Virgin spermatheca0 ± 00 of 4 0.02Down
Mated spermatheca1 ± 00 of 4 0.04Down
Adult carcass2 ± 00 of 4 0.10Down
Larval CNS0 ± 00 of 4 0.01Down
Larval Salivary gland0 ± 00 of 4 0.03Down
Larval midgut2 ± 00 of 4 0.07Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut0 ± 00 of 4 0.03Down
Larval fat body19 ± 102 of 4 0.60None
Larval trachea2 ± 30 of 4 0.09Down
Larval carcass1 ± 00 of 4 0.06Down
S2 cells (growing)0 ± 00 of 4 0.03Down
Whole fly31 ± 14 of 4

Looking for FBgn0036160. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime