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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036168 through 18771 annotations produced 1 hits



(CG7512):

Annotation Number : CG7512
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036168
Gbrowse : chr3L:11510194-11511863 (+) // 100.0 //
Probeset : 1632910_at
Accessions : protein= NP_001097585;, nucleotide= NM_001104115;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electr
FlyMine data for FBgn0036168.
BioGrid reports that CG7512 interacts with CG7583 .
VDRC has 3 RNAi stocks for FBgn0036168 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.30None
Head0 ± 00 of 4 0.10Down
Eye3 ± 00 of 4 0.66None
Thoracicoabdominal ganglion2 ± 00 of 4 0.60None
Salivary gland3 ± 10 of 4 0.78None
Crop5 ± 00 of 4 1.10None
Midgut6 ± 20 of 4 1.40None
Tubule4 ± 00 of 4 1.00None
Hindgut11 ± 11 of 4 2.30Up
Heart4 ± 00 of 4 0.97None
Fat body9 ± 40 of 4 1.86None
Ovary3 ± 10 of 4 0.70None
Testis18 ± 14 of 4 3.80Up
Male accessory glands3 ± 20 of 4 0.80None
Virgin spermatheca7 ± 00 of 4 1.53None
Mated spermatheca10 ± 10 of 4 2.07Up
Adult carcass6 ± 30 of 4 1.40None
Larval CNS2 ± 00 of 4 0.60None
Larval Salivary gland17 ± 32 of 4 3.54Up
Larval midgut7 ± 11 of 4 1.43None
Larval tubule1 ± 00 of 4 0.40None
Larval hindgut4 ± 10 of 4 0.88None
Larval fat body3 ± 10 of 4 0.80None
Larval trachea88 ± 134 of 418.00Up
Larval carcass3 ± 10 of 4 0.79None
S2 cells (growing)4 ± 00 of 4 0.85None
Whole fly4 ± 10 of 4

Looking for FBgn0036168. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime