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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036177 through 18771 annotations produced 1 hits



/// (CG33268 /// CG7377):

Annotation Number : CG33268
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036176 /// FBgn0036177
Gbrowse : chr3L:11582794-11583079 (+) // 96.84 // /// chr3L:11584037-11584322 (-) // 100.0 //
Probeset : 1625142_s_at
Accessions : protein= NP_996052; /// NP_996053;, nucleotide= NM_206330; /// NM_206331;
FlyMine data for FBgn0036176 /// FBgn0036177.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain17 ± 20 of 4 1.40None
Head6 ± 20 of 4 0.50None
Eye13 ± 20 of 4 1.12None
Thoracicoabdominal ganglion9 ± 20 of 4 0.80None
Salivary gland16 ± 70 of 4 1.36None
Crop2 ± 00 of 4 0.20None
Midgut38 ± 50 of 4 3.20Up
Tubule5 ± 10 of 4 0.50Down
Hindgut7 ± 50 of 4 0.60None
Heart2 ± 00 of 4 0.18None
Fat body7 ± 40 of 4 0.64None
Ovary5 ± 10 of 4 0.40None
Testis13 ± 11 of 4 1.10None
Male accessory glands6 ± 10 of 4 0.50None
Virgin spermatheca7 ± 20 of 4 0.63None
Mated spermatheca8 ± 20 of 4 0.68None
Adult carcass11 ± 30 of 4 0.90None
Larval CNS6 ± 20 of 4 0.54None
Larval Salivary gland73 ± 144 of 4 6.10Up
Larval midgut22 ± 50 of 4 1.84None
Larval tubule26 ± 12 of 4 2.20Up
Larval hindgut4 ± 00 of 4 0.35None
Larval fat body6 ± 10 of 4 0.60None
Larval trachea2 ± 30 of 4 0.24None
Larval carcass2 ± 10 of 4 0.22None
S2 cells (growing)6 ± 10 of 4 0.56None
Whole fly12 ± 30 of 4

Looking for FBgn0036177. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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