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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036191 through 18771 annotations produced 1 hits



Sugar-baby (Sug):

Annotation Number : CG7334
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036191
Gbrowse : chr3L:11677083-11681925 (+) // 100.0 //
Probeset : 1638811_at
Accessions : protein= NP_001137934; /// NP_648493; /// NP_996057;, nucleotide= NM_001144462; /// NM_140236; /// NM_206335;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036191.
BDGP gene expression has embryonic in situ data for CG7334: 12 pix of staining in 5 body parts.
VDRC has 2 RNAi stocks for FBgn0036191 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain27 14 of 4 0.50Down
Head24 14 of 4 0.40Down
Eye31 24 of 4 0.51Down
Thoracicoabdominal ganglion28 24 of 4 0.50Down
Salivary gland22 42 of 4 0.37Down
Crop52 54 of 4 0.90None
Midgut112 24 of 4 1.80Up
Tubule396 1164 of 4 6.50Up
Hindgut34 34 of 4 0.60Down
Heart89 84 of 4 1.47Up
Fat body56 124 of 4 0.92None
Ovary87 34 of 4 1.40Up
Testis41 24 of 4 0.70Down
Male accessory glands17 13 of 4 0.30Down
Virgin spermatheca17 14 of 4 0.29Down
Mated spermatheca17 14 of 4 0.28Down
Adult carcass46 34 of 4 0.80Down
Larval CNS94 134 of 4 1.54Up
Larval Salivary gland11 12 of 4 0.18Down
Larval midgut68 34 of 4 1.12None
Larval tubule63 54 of 4 1.00None
Larval hindgut24 14 of 4 0.40Down
Larval fat body16 22 of 4 0.30Down
Larval trachea25 54 of 4 0.42Down
Larval carcass15 14 of 4 0.25Down
S2 cells (growing)46 04 of 4 0.77Down
Whole fly61 14 of 4

Looking for FBgn0036191. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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