FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036199 through 18771 annotations produced 2 hits

Bmcp (Bmcp):

Annotation Number : CG7314
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036199
Gbrowse : chr3L:11714019-11721218 (+) // 100.0 //
Probeset : 1627742_at
Accessions : protein= NP_648501; /// NP_729738;, nucleotide= NM_140244; /// NM_168472;
Pathway : 0005740 // mitochondrial envelope // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0005488 // binding // inferred from electroni
FlyMine data for FBgn0036199.
BDGP gene expression has embryonic in situ data for Bmcp: 4 pix of staining in 1 body parts.
Homophila reports that CG7314 is a close match (3e-11) to human gene SLC25A20;CACT;CAC (NP_000378), a gene associated with Carnitine-acylcarnitine translocase deficiency (3).
TRiP has 1 RNAi stocks for FBgn0036199 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	62 ± 6	4 of 4	0.60	Down
Head	94 ± 15	4 of 4	1.00	None
Eye	37 ± 4	4 of 4	0.38	Down
Thoracicoabdominal ganglion	64 ± 5	4 of 4	0.70	Down
Salivary gland	48 ± 5	4 of 4	0.49	Down
Crop	85 ± 6	4 of 4	0.90	None
Midgut	48 ± 1	4 of 4	0.50	Down
Tubule	191 ± 12	4 of 4	2.00	Up
Hindgut	62 ± 2	4 of 4	0.60	Down
Heart	45 ± 1	4 of 4	0.47	Down
Fat body	275 ± 31	4 of 4	2.81	Up
Ovary	287 ± 24	4 of 4	2.90	Up
Testis	34 ± 3	4 of 4	0.40	Down
Male accessory glands	61 ± 1	4 of 4	0.60	Down
Virgin spermatheca	352 ± 50	4 of 4	3.60	Up
Mated spermatheca	254 ± 46	4 of 4	2.60	Up
Adult carcass	67 ± 3	4 of 4	0.70	None
Larval CNS	95 ± 26	4 of 4	0.98	None
Larval Salivary gland	46 ± 9	4 of 4	0.47	Down
Larval midgut	93 ± 6	4 of 4	0.95	None
Larval tubule	112 ± 13	4 of 4	1.10	None
Larval hindgut	69 ± 3	4 of 4	0.70	None
Larval fat body	114 ± 13	4 of 4	1.20	None
Larval trachea	26 ± 3	4 of 4	0.27	Down
Larval carcass	62 ± 11	4 of 4	0.63	None
S2 cells (growing)	113 ± 10	4 of 4	1.16	None
Whole fly	98 ± 10	4 of 4

Bmcp (Bmcp):

Annotation Number : CG7314
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036199
Gbrowse : chr3L:11714019-11716425 (+) // 100.0 //
Probeset : 1638414_a_at
Accessions : protein= NP_648501; /// NP_729738;, nucleotide= NM_140244; /// NM_168472;
Pathway : 0005740 // mitochondrial envelope // inferred from sequence or structural similarity /// 0005743 // mitochondrial inner
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0005488 // binding // inferred from electroni
FlyMine data for FBgn0036199.
BDGP gene expression has embryonic in situ data for Bmcp: 4 pix of staining in 1 body parts.
Homophila reports that CG7314 is a close match (3e-11) to human gene SLC25A20;CACT;CAC (NP_000378), a gene associated with Carnitine-acylcarnitine translocase deficiency (3).
TRiP has 1 RNAi stocks for FBgn0036199 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	57 ± 2	4 of 4	0.80	Down
Head	71 ± 3	4 of 4	1.00	None
Eye	57 ± 12	4 of 4	0.79	None
Thoracicoabdominal ganglion	55 ± 2	4 of 4	0.80	Down
Salivary gland	54 ± 4	4 of 4	0.74	Down
Crop	55 ± 0	4 of 4	0.80	Down
Midgut	38 ± 1	4 of 4	0.50	Down
Tubule	129 ± 10	4 of 4	1.80	Up
Hindgut	59 ± 3	4 of 4	0.80	Down
Heart	104 ± 7	4 of 4	1.42	Up
Fat body	136 ± 12	4 of 4	1.87	Up
Ovary	152 ± 3	4 of 4	2.10	Up
Testis	32 ± 1	4 of 4	0.40	Down
Male accessory glands	70 ± 2	4 of 4	1.00	None
Virgin spermatheca	90 ± 9	4 of 4	1.23	None
Mated spermatheca	74 ± 5	4 of 4	1.02	None
Adult carcass	68 ± 6	4 of 4	0.90	None
Larval CNS	59 ± 3	4 of 4	0.82	Down
Larval Salivary gland	53 ± 1	4 of 4	0.73	Down
Larval midgut	54 ± 3	4 of 4	0.75	Down
Larval tubule	76 ± 0	4 of 4	1.00	None
Larval hindgut	45 ± 1	4 of 4	0.62	Down
Larval fat body	56 ± 8	4 of 4	0.80	None
Larval trachea	47 ± 4	4 of 4	0.65	Down
Larval carcass	44 ± 2	4 of 4	0.61	Down
S2 cells (growing)	164 ± 2	4 of 4	2.25	Up
Whole fly	73 ± 4	4 of 4

Looking for FBgn0036199. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720