Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036207 through 18771 annotations produced 1 hits



(CG10907):

Annotation Number : CG10907
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036207
Gbrowse : chr3L:11786643-11788521 (+) // 100.0 //
Probeset : 1631971_at
Accessions : protein= NP_648508;, nucleotide= NM_140251;
Pathway : via spliceosome // inferred by curator /// 0006457 // protein folding // inferred from electronic annotation"
Interpro : 0071011 // precatalytic spliceosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferre
FlyMine data for FBgn0036207.
BDGP gene expression has embryonic in situ data for CG10907: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0036207 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain92 44 of 4 1.00None
Head57 54 of 4 0.60Down
Eye91 44 of 4 0.99None
Thoracicoabdominal ganglion86 24 of 4 0.90None
Salivary gland57 54 of 4 0.62Down
Crop60 34 of 4 0.60Down
Midgut49 24 of 4 0.50Down
Tubule48 44 of 4 0.50Down
Hindgut41 14 of 4 0.50Down
Heart88 54 of 4 0.95None
Fat body99 74 of 4 1.07None
Ovary146 34 of 4 1.60Up
Testis72 34 of 4 0.80Down
Male accessory glands2686 1014 of 428.90Up
Virgin spermatheca75 54 of 4 0.82Down
Mated spermatheca72 14 of 4 0.78Down
Adult carcass58 24 of 4 0.60Down
Larval CNS200 204 of 4 2.16Up
Larval Salivary gland86 14 of 4 0.93None
Larval midgut42 34 of 4 0.46Down
Larval tubule68 34 of 4 0.70Down
Larval hindgut57 44 of 4 0.62Down
Larval fat body77 44 of 4 0.80Down
Larval trachea115 64 of 4 1.24Up
Larval carcass64 34 of 4 0.70Down
S2 cells (growing)91 24 of 4 0.99None
Whole fly92 34 of 4

Looking for FBgn0036207. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime