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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036213 through 18771 annotations produced 1 hits



Ribosomal protein L10Ab (RpL10Ab):

Annotation Number : CG7283
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036213
Gbrowse : chr3L:11815951-11817311 (+) // 100.0 //
Probeset : 1638570_a_at
Accessions : protein= NP_648514; /// NP_729754;, nucleotide= NM_140257; /// NM_168481;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct as
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // infer
FlyMine data for FBgn0036213.
BDGP gene expression has embryonic in situ data for CG7283: 4 pix of staining in 1 body parts.
BioGrid reports that CG7283 interacts with CG8155 .
TRiP has 1 RNAi stocks for FBgn0036213 available for purchase.
VDRC has 5 RNAi stocks for FBgn0036213 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2475 414 of 4 0.70Down
Head4117 1434 of 4 1.10None
Eye5916 934 of 4 1.62Up
Thoracicoabdominal ganglion3614 864 of 4 1.00None
Salivary gland9091 3834 of 4 2.50Up
Crop5351 2734 of 4 1.50Up
Midgut4837 1024 of 4 1.30Up
Tubule5304 294 of 4 1.50Up
Hindgut4571 1314 of 4 1.30Up
Heart5961 4184 of 4 1.64Up
Fat body5218 5614 of 4 1.43Up
Ovary3014 234 of 4 0.80Down
Testis1277 124 of 4 0.40Down
Male accessory glands8263 2074 of 4 2.30Up
Virgin spermatheca5259 1804 of 4 1.44Up
Mated spermatheca5436 1824 of 4 1.49Up
Adult carcass5271 2914 of 4 1.40Up
Larval CNS2495 1894 of 4 0.69Down
Larval Salivary gland7176 3774 of 4 1.97Up
Larval midgut4468 1374 of 4 1.23Up
Larval tubule4466 444 of 4 1.20Up
Larval hindgut3999 94 of 4 1.10None
Larval fat body6387 7204 of 4 1.80Up
Larval trachea5288 1744 of 4 1.45Up
Larval carcass4389 2774 of 4 1.21None
S2 cells (growing)3971 684 of 4 1.09None
Whole fly3642 1684 of 4

Looking for FBgn0036213. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime