Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036259 through 18771 annotations produced 1 hits



(CG9760):

Annotation Number : CG9760
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036259
Gbrowse : chr3L:12150915-12152682 (-) // 100.0 //
Probeset : 1631365_at
Accessions : protein= NP_648554;, nucleotide= NM_140297;
FlyMine data for FBgn0036259.
VDRC has 4 RNAi stocks for FBgn0036259 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain17 ± 14 of 4 2.70Up
Head11 ± 14 of 4 1.70Up
Eye9 ± 01 of 4 1.45None
Thoracicoabdominal ganglion12 ± 14 of 4 1.90Up
Salivary gland7 ± 20 of 4 1.20None
Crop22 ± 34 of 4 3.50Up
Midgut4 ± 00 of 4 0.80None
Tubule8 ± 01 of 4 1.30Up
Hindgut8 ± 10 of 4 1.30None
Heart5 ± 01 of 4 0.93None
Fat body17 ± 23 of 4 2.73Up
Ovary1 ± 00 of 4 0.30Down
Testis2 ± 10 of 4 0.30Down
Male accessory glands5 ± 20 of 4 0.90None
Virgin spermatheca9 ± 12 of 4 1.41None
Mated spermatheca8 ± 21 of 4 1.33None
Adult carcass13 ± 00 of 4 2.10Up
Larval CNS9 ± 04 of 4 1.55Up
Larval Salivary gland3 ± 10 of 4 0.48None
Larval midgut1 ± 00 of 4 0.25Down
Larval tubule7 ± 21 of 4 1.20None
Larval hindgut3 ± 11 of 4 0.54None
Larval fat body11 ± 12 of 4 1.80None
Larval trachea1 ± 10 of 4 0.29Down
Larval carcass3 ± 10 of 4 0.54None
S2 cells (growing)3 ± 00 of 4 0.55None
Whole fly6 ± 11 of 4

Looking for FBgn0036259. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime