FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036272 through 18771 annotations produced 1 hits

(CG4300):

Annotation Number : CG4300
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036272
Gbrowse : chr3L:12264752-12270366 (-) // 100.0 //
Probeset : 1633292_a_at
Accessions : protein= NP_648565; /// NP_729798;, nucleotide= NM_140308; /// NM_168496;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004766 // spermidine synthase activity // infe
FlyMine data for FBgn0036272.
BDGP gene expression has embryonic in situ data for CG4300: 10 pix of staining in 12 body parts.
Homophila reports that CG4300 is a close match (2e-61) to human gene SMS;SRS;MRSR (NP_004586), a gene associated with Mental retardation, X-linked, Snyder-Robinson type, 309583 (3).
BioGrid reports that CG4300 interacts with CG6801 CG9291 .
VDRC has 3 RNAi stocks for FBgn0036272 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	437 ± 23	4 of 4	1.30	Up
Head	183 ± 6	4 of 4	0.50	Down
Eye	201 ± 10	4 of 4	0.60	Down
Thoracicoabdominal ganglion	526 ± 6	4 of 4	1.60	Up
Salivary gland	155 ± 7	4 of 4	0.46	Down
Crop	62 ± 2	4 of 4	0.20	Down
Midgut	101 ± 4	4 of 4	0.30	Down
Tubule	227 ± 8	4 of 4	0.70	Down
Hindgut	117 ± 4	4 of 4	0.30	Down
Heart	99 ± 8	4 of 4	0.29	Down
Fat body	89 ± 5	4 of 4	0.26	Down
Ovary	879 ± 8	4 of 4	2.60	Up
Testis	210 ± 8	4 of 4	0.60	Down
Male accessory glands	1309 ± 59	4 of 4	3.90	Up
Virgin spermatheca	72 ± 6	4 of 4	0.22	Down
Mated spermatheca	88 ± 7	4 of 4	0.26	Down
Adult carcass	255 ± 10	4 of 4	0.80	Down
Larval CNS	752 ± 25	4 of 4	2.24	Up
Larval Salivary gland	260 ± 4	4 of 4	0.77	Down
Larval midgut	104 ± 7	4 of 4	0.31	Down
Larval tubule	255 ± 12	4 of 4	0.80	Down
Larval hindgut	150 ± 7	4 of 4	0.45	Down
Larval fat body	38 ± 0	4 of 4	0.10	Down
Larval trachea	108 ± 8	4 of 4	0.32	Down
Larval carcass	277 ± 51	4 of 4	0.83	None
S2 cells (growing)	180 ± 4	4 of 4	0.54	Down
Whole fly	336 ± 17	4 of 4

Looking for FBgn0036272. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720