Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036292 through 18771 annotations produced 1 hits



(CG10646):

Annotation Number : CG10646
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036292
Gbrowse : chr3L:12495565-12497009 (-) // 100.0 //
Probeset : 1624427_at
Accessions : protein= NP_648581;, nucleotide= NM_140324;
FlyMine data for FBgn0036292.
BDGP gene expression has embryonic in situ data for CG10646: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0036292 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain96 ± 14 of 4 1.30Up
Head57 ± 14 of 4 0.80Down
Eye78 ± 34 of 4 1.09None
Thoracicoabdominal ganglion102 ± 04 of 4 1.40Up
Salivary gland111 ± 54 of 4 1.55Up
Crop67 ± 34 of 4 0.90None
Midgut45 ± 24 of 4 0.60Down
Tubule83 ± 14 of 4 1.10Up
Hindgut60 ± 44 of 4 0.80None
Heart52 ± 44 of 4 0.73Down
Fat body40 ± 14 of 4 0.56Down
Ovary132 ± 24 of 4 1.80Up
Testis15 ± 14 of 4 0.20Down
Male accessory glands77 ± 74 of 4 1.10None
Virgin spermatheca78 ± 24 of 4 1.08None
Mated spermatheca94 ± 54 of 4 1.31Up
Adult carcass45 ± 44 of 4 0.60Down
Larval CNS96 ± 54 of 4 1.33Up
Larval Salivary gland99 ± 34 of 4 1.37Up
Larval midgut31 ± 34 of 4 0.44Down
Larval tubule73 ± 14 of 4 1.00None
Larval hindgut36 ± 14 of 4 0.50Down
Larval fat body48 ± 44 of 4 0.70Down
Larval trachea59 ± 44 of 4 0.82None
Larval carcass37 ± 04 of 4 0.52Down
S2 cells (growing)95 ± 24 of 4 1.32Up
Whole fly72 ± 44 of 4

Looking for FBgn0036292. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime