FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036299 through 18771 annotations produced 1 hits

Transferrin 2 (Tsf2):

Annotation Number : CG10620
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036299
Gbrowse : chr3L:12523535-12526821 (-) // 100.0 //
Probeset : 1628943_at
Accessions : protein= NP_524044;, nucleotide= NM_079320;
Pathway : 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region /
Interpro : 0005381 // iron ion transmembrane transporter activity // inferred from sequence or structural similarity /// 0008199 //
FlyMine data for FBgn0036299.
BDGP gene expression has embryonic in situ data for Tsf2: 37 pix of staining in 26 body parts.
Homophila reports that CG10620 is a close match (1e-46) to human gene TF (NP_001054), a gene associated with Atransferrinemia, 209300 (3);{Iron deficiency anemia, susceptibility to} (3).
BioGrid reports that CG10620 interacts with CG14224 CG32264 .
VDRC has 1 RNAi stocks for FBgn0036299 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	77 ± 2	4 of 4	0.50	Down
Head	159 ± 7	4 of 4	0.90	None
Eye	152 ± 3	4 of 4	0.89	None
Thoracicoabdominal ganglion	61 ± 4	4 of 4	0.40	Down
Salivary gland	369 ± 16	4 of 4	2.16	Up
Crop	330 ± 14	4 of 4	1.90	Up
Midgut	31 ± 2	4 of 4	0.20	Down
Tubule	26 ± 1	3 of 4	0.20	Down
Hindgut	241 ± 2	4 of 4	1.40	Up
Heart	29 ± 1	4 of 4	0.17	Down
Fat body	41 ± 8	4 of 4	0.24	Down
Ovary	278 ± 9	4 of 4	1.60	Up
Testis	72 ± 3	4 of 4	0.40	Down
Male accessory glands	268 ± 8	4 of 4	1.60	Up
Virgin spermatheca	121 ± 1	4 of 4	0.71	Down
Mated spermatheca	158 ± 16	4 of 4	0.93	None
Adult carcass	119 ± 7	4 of 4	0.70	Down
Larval CNS	95 ± 5	4 of 4	0.56	Down
Larval Salivary gland	319 ± 14	4 of 4	1.87	Up
Larval midgut	32 ± 1	4 of 4	0.19	Down
Larval tubule	17 ± 3	4 of 4	0.10	Down
Larval hindgut	331 ± 9	4 of 4	1.94	Up
Larval fat body	231 ± 18	4 of 4	1.40	Up
Larval trachea	505 ± 12	4 of 4	2.96	Up
Larval carcass	198 ± 4	4 of 4	1.16	None
S2 cells (growing)	104 ± 2	4 of 4	0.61	Down
Whole fly	170 ± 9	4 of 4

Looking for FBgn0036299. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720