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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036325 through 18771 annotations produced 1 hits



(CG10752):

Annotation Number : CG10752
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036325
Gbrowse : chr3L:12945782-12947662 (-) // 100.0 //
Probeset : 1629378_at
Accessions : protein= NP_648614;, nucleotide= NM_140357;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0036325.
BioGrid reports that CG10752 interacts with CG3630 .
VDRC has 2 RNAi stocks for FBgn0036325 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.10Down
Head2 ± 10 of 4 0.10Down
Eye1 ± 00 of 4 0.09Down
Thoracicoabdominal ganglion4 ± 10 of 4 0.30Down
Salivary gland10 ± 41 of 4 0.64None
Crop1 ± 00 of 4 0.10Down
Midgut3 ± 11 of 4 0.20Down
Tubule3 ± 00 of 4 0.20Down
Hindgut3 ± 11 of 4 0.20Down
Heart3 ± 10 of 4 0.23Down
Fat body4 ± 31 of 4 0.27Down
Ovary1 ± 00 of 4 0.10Down
Testis242 ± 64 of 414.90Up
Male accessory glands5 ± 20 of 4 0.30Down
Virgin spermatheca4 ± 10 of 4 0.26Down
Mated spermatheca5 ± 00 of 4 0.35Down
Adult carcass7 ± 31 of 4 0.50None
Larval CNS2 ± 11 of 4 0.15Down
Larval Salivary gland5 ± 11 of 4 0.30Down
Larval midgut2 ± 00 of 4 0.13Down
Larval tubule3 ± 10 of 4 0.20Down
Larval hindgut2 ± 01 of 4 0.13Down
Larval fat body54 ± 303 of 4 3.30None
Larval trachea3 ± 11 of 4 0.18Down
Larval carcass1 ± 00 of 4 0.11Down
S2 cells (growing)0 ± 00 of 4 0.04Down
Whole fly16 ± 24 of 4

Looking for FBgn0036325. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime