Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036334 through 18771 annotations produced 1 hits



(CG11267):

Annotation Number : CG11267
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036334
Gbrowse : chr3L:13009156-13010007 (+) // 100.0 //
Probeset : 1629790_at
Accessions : protein= NP_648622;, nucleotide= NM_140365;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence or st
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0005524 // ATP binding // inferred from electronic
FlyMine data for FBgn0036334.
BDGP gene expression has embryonic in situ data for CG11267: 19 pix of staining in 18 body parts.
BioGrid reports that CG11267 interacts with CG1530 CG8187 .
VDRC has 1 RNAi stocks for FBgn0036334 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain855 ± 264 of 4 0.70Down
Head665 ± 154 of 4 0.60Down
Eye529 ± 164 of 4 0.44Down
Thoracicoabdominal ganglion1198 ± 334 of 4 1.00None
Salivary gland412 ± 214 of 4 0.34Down
Crop520 ± 334 of 4 0.40Down
Midgut598 ± 394 of 4 0.50Down
Tubule843 ± 244 of 4 0.70Down
Hindgut798 ± 334 of 4 0.70Down
Heart1111 ± 424 of 4 0.93None
Fat body1258 ± 1744 of 4 1.05None
Ovary1887 ± 344 of 4 1.60Up
Testis436 ± 174 of 4 0.40Down
Male accessory glands571 ± 554 of 4 0.50Down
Virgin spermatheca613 ± 564 of 4 0.51Down
Mated spermatheca715 ± 344 of 4 0.60Down
Adult carcass772 ± 364 of 4 0.60Down
Larval CNS1144 ± 644 of 4 0.95None
Larval Salivary gland1074 ± 554 of 4 0.90None
Larval midgut583 ± 494 of 4 0.49Down
Larval tubule290 ± 214 of 4 0.20Down
Larval hindgut1391 ± 1304 of 4 1.16None
Larval fat body263 ± 284 of 4 0.20Down
Larval trachea1246 ± 1924 of 4 1.04None
Larval carcass827 ± 1194 of 4 0.69None
S2 cells (growing)873 ± 194 of 4 0.73Down
Whole fly1199 ± 204 of 4

Looking for FBgn0036334. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime