FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036337 through 18771 annotations produced 1 hits

(CG11255):

Annotation Number : CG11255
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036337
Gbrowse : chr3L:13013085-13015844 (-) // 100.0 //
Probeset : 1623695_a_at
Accessions : protein= NP_648624; /// NP_729863;, nucleotide= NM_140367; /// NM_168532;
Interpro : 0004001 // adenosine kinase activity // inferred from sequence or structural similarity /// 0004001 // adenosine kinase
FlyMine data for FBgn0036337.
BDGP gene expression has embryonic in situ data for CG11255: 16 pix of staining in 7 body parts.
BioGrid reports that CG11255 interacts with CG17358 CG9480 .
TRiP has 1 RNAi stocks for FBgn0036337 available for purchase.
VDRC has 2 RNAi stocks for FBgn0036337 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	222 ± 1	4 of 4	0.60	Down
Head	734 ± 22	4 of 4	2.00	Up
Eye	487 ± 49	4 of 4	1.32	None
Thoracicoabdominal ganglion	238 ± 3	4 of 4	0.60	Down
Salivary gland	217 ± 9	4 of 4	0.59	Down
Crop	319 ± 6	4 of 4	0.90	Down
Midgut	257 ± 9	4 of 4	0.70	Down
Tubule	250 ± 9	4 of 4	0.70	Down
Hindgut	289 ± 5	4 of 4	0.80	Down
Heart	1049 ± 85	4 of 4	2.85	Up
Fat body	1554 ± 127	4 of 4	4.22	Up
Ovary	372 ± 3	4 of 4	1.00	None
Testis	40 ± 4	4 of 4	0.10	Down
Male accessory glands	262 ± 15	4 of 4	0.70	Down
Virgin spermatheca	1641 ± 77	4 of 4	4.45	Up
Mated spermatheca	1650 ± 61	4 of 4	4.48	Up
Adult carcass	987 ± 53	4 of 4	2.70	Up
Larval CNS	174 ± 15	4 of 4	0.47	Down
Larval Salivary gland	172 ± 9	4 of 4	0.47	Down
Larval midgut	111 ± 10	4 of 4	0.30	Down
Larval tubule	216 ± 5	4 of 4	0.60	Down
Larval hindgut	178 ± 17	4 of 4	0.49	Down
Larval fat body	1877 ± 163	4 of 4	5.10	Up
Larval trachea	328 ± 40	4 of 4	0.89	None
Larval carcass	199 ± 13	4 of 4	0.54	Down
S2 cells (growing)	234 ± 1	4 of 4	0.64	Down
Whole fly	368 ± 9	4 of 4

Looking for FBgn0036337. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720