FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036340 through 18771 annotations produced 1 hits

SRm160 (SRm160):

Annotation Number : CG11274
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036340
Gbrowse : chr3L:13029925-13033511 (+) // 100.0 //
Probeset : 1632470_at
Accessions : protein= NP_648627;, nucleotide= NM_140370;
Pathway : via spliceosome // inferred by curator /// 0006397 // mRNA processing // inferred from electronic annotation"
Interpro : 0035145 // exon-exon junction complex // traceable author statement /// 0071011 // precatalytic spliceosome // inferred
FlyMine data for FBgn0036340.
BioGrid reports that CG11274 interacts with CG31211 CG3918 CG6843 CG9212 .
TRiP has 1 RNAi stocks for FBgn0036340 available for purchase.
VDRC has 2 RNAi stocks for FBgn0036340 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	76 ± 2	4 of 4	1.90	Up
Head	27 ± 2	4 of 4	0.70	Down
Eye	38 ± 3	4 of 4	0.98	None
Thoracicoabdominal ganglion	66 ± 3	4 of 4	1.70	Up
Salivary gland	19 ± 2	0 of 4	0.49	Down
Crop	17 ± 0	4 of 4	0.40	Down
Midgut	6 ± 2	0 of 4	0.20	Down
Tubule	14 ± 1	2 of 4	0.40	Down
Hindgut	17 ± 1	4 of 4	0.40	Down
Heart	17 ± 2	4 of 4	0.43	Down
Fat body	10 ± 3	1 of 4	0.25	Down
Ovary	81 ± 2	4 of 4	2.00	Up
Testis	23 ± 1	4 of 4	0.60	Down
Male accessory glands	33 ± 4	4 of 4	0.80	None
Virgin spermatheca	11 ± 1	3 of 4	0.28	Down
Mated spermatheca	9 ± 1	2 of 4	0.24	Down
Adult carcass	19 ± 1	4 of 4	0.50	Down
Larval CNS	109 ± 5	4 of 4	2.77	Up
Larval Salivary gland	15 ± 1	1 of 4	0.39	Down
Larval midgut	1 ± 0	0 of 4	0.03	Down
Larval tubule	22 ± 2	2 of 4	0.60	Down
Larval hindgut	22 ± 2	4 of 4	0.56	Down
Larval fat body	21 ± 5	3 of 4	0.50	Down
Larval trachea	43 ± 6	4 of 4	1.10	None
Larval carcass	25 ± 1	4 of 4	0.63	Down
S2 cells (growing)	57 ± 4	4 of 4	1.45	Up
Whole fly	39 ± 2	4 of 4

Looking for FBgn0036340. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720