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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0036343 through 18771 annotations produced 1 hits


Annotation Number : CG14115
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036343
Gbrowse : chr3L:13053621-13054494 (-) // 100.0 //
Probeset : 1637837_at
Accessions : protein= NP_648629;, nucleotide= NM_140372;
FlyMine data for FBgn0036343.
VDRC has 1 RNAi stocks for FBgn0036343 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 1.00None
Head2 10 of 4 2.20None
Eye0 00 of 4 0.73None
Thoracicoabdominal ganglion1 00 of 4 0.90None
Salivary gland11 30 of 410.20None
Crop4 10 of 4 3.60None
Midgut5 20 of 4 5.10None
Tubule5 00 of 4 4.40Up
Hindgut36 24 of 432.30Up
Heart1 00 of 4 1.18None
Fat body2 10 of 4 2.27None
Ovary1 00 of 4 1.40None
Testis1 00 of 4 0.90None
Male accessory glands5 10 of 4 4.60None
Virgin spermatheca5 00 of 4 5.24Up
Mated spermatheca6 10 of 4 5.89Up
Adult carcass2 00 of 4 2.20None
Larval CNS3 20 of 4 3.16None
Larval Salivary gland1 00 of 4 1.67None
Larval midgut5 10 of 4 4.91None
Larval tubule3 10 of 4 3.00None
Larval hindgut3 11 of 4 2.87None
Larval fat body7 20 of 4 6.20None
Larval trachea0 00 of 4 0.84None
Larval carcass3 00 of 4 3.29None
S2 cells (growing)1 00 of 4 1.20None
Whole fly1 00 of 4

Looking for FBgn0036343. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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