FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036349 through 18771 annotations produced 1 hits

SoxNeuro Co-Factor (SNCF):

Annotation Number : CG14112
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036349
Gbrowse : chr3L:13371684-13372295 (+) // 99.35 //
Probeset : 1627407_at
Accessions : protein= NP_648635;, nucleotide= NM_140378;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005730 // nucleolus // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036349.
BDGP gene expression has embryonic in situ data for CG14112: 34 pix of staining in 12 body parts.
BioGrid reports that CG14112 interacts with CG1676 CG3099 CG4918 CG5478 CG6025 CG6742 CG8929 CG9273 .
TRiP has 1 RNAi stocks for FBgn0036349 available for purchase.
VDRC has 1 RNAi stocks for FBgn0036349 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.30	None
Head	8 ± 2	0 of 4	2.00	None
Eye	2 ± 1	0 of 4	0.65	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.40	None
Salivary gland	14 ± 3	0 of 4	3.49	None
Crop	4 ± 2	0 of 4	1.20	None
Midgut	6 ± 1	0 of 4	1.50	None
Tubule	3 ± 1	0 of 4	0.90	None
Hindgut	2 ± 0	0 of 4	0.50	None
Heart	1 ± 0	0 of 4	0.46	None
Fat body	6 ± 5	0 of 4	1.67	None
Ovary	1 ± 0	0 of 4	0.30	None
Testis	2 ± 1	0 of 4	0.70	None
Male accessory glands	1 ± 0	0 of 4	0.50	None
Virgin spermatheca	3 ± 0	0 of 4	0.75	None
Mated spermatheca	5 ± 1	0 of 4	1.40	None
Adult carcass	4 ± 1	0 of 4	1.20	None
Larval CNS	1 ± 0	0 of 4	0.27	None
Larval Salivary gland	1 ± 0	0 of 4	0.47	None
Larval midgut	5 ± 1	0 of 4	1.44	None
Larval tubule	1 ± 0	0 of 4	0.50	None
Larval hindgut	3 ± 0	0 of 4	0.96	None
Larval fat body	6 ± 3	0 of 4	1.50	None
Larval trachea	3 ± 1	0 of 4	0.80	None
Larval carcass	2 ± 0	0 of 4	0.54	None
S2 cells (growing)	1 ± 0	0 of 4	0.33	None
Whole fly	4 ± 1	0 of 4

Looking for FBgn0036349. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720