Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036356 through 18771 annotations produced 1 hits



(CG10222):

Annotation Number : CG10222
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036356
Gbrowse : chr3L:13404628-13405553 (-) // 100.0 //
Probeset : 1641360_at
Accessions : protein= NP_648641;, nucleotide= NM_140384;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from phy
FlyMine data for FBgn0036356.
BioGrid reports that CG10222 interacts with CG32683 CG3704 .
VDRC has 2 RNAi stocks for FBgn0036356 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain26 ± 14 of 4 0.40Down
Head27 ± 04 of 4 0.50Down
Eye47 ± 14 of 4 0.81None
Thoracicoabdominal ganglion20 ± 14 of 4 0.30Down
Salivary gland45 ± 33 of 4 0.76None
Crop38 ± 24 of 4 0.70Down
Midgut37 ± 10 of 4 0.60Down
Tubule27 ± 14 of 4 0.50Down
Hindgut37 ± 14 of 4 0.60Down
Heart37 ± 24 of 4 0.64Down
Fat body34 ± 34 of 4 0.59Down
Ovary116 ± 64 of 4 2.00Up
Testis11 ± 11 of 4 0.20Down
Male accessory glands55 ± 34 of 4 0.90None
Virgin spermatheca26 ± 22 of 4 0.45Down
Mated spermatheca27 ± 22 of 4 0.46Down
Adult carcass27 ± 41 of 4 0.50Down
Larval CNS43 ± 14 of 4 0.73None
Larval Salivary gland51 ± 44 of 4 0.87None
Larval midgut25 ± 20 of 4 0.44Down
Larval tubule42 ± 24 of 4 0.70Down
Larval hindgut34 ± 44 of 4 0.58Down
Larval fat body39 ± 94 of 4 0.70None
Larval trachea77 ± 64 of 4 1.32Up
Larval carcass34 ± 33 of 4 0.59Down
S2 cells (growing)48 ± 44 of 4 0.82None
Whole fly58 ± 54 of 4

Looking for FBgn0036356. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime