FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036369 through 18771 annotations produced 2 hits

MKP-like (CG10089):

Annotation Number : CG10089
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036369
Gbrowse : chr3L:13459926-13467643 (-) // 100.0 //
Probeset : 1635956_at
Accessions : protein= NP_648654; /// NP_729907; /// NP_729908; /// NP_729909;, nucleotide= NM_140397; /// NM_168548; /// NM_168549; /// NM_168550;
Interpro : 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0008138 //
FlyMine data for FBgn0036369.
BDGP gene expression has embryonic in situ data for CG10089: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0036369 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	64 ± 2	4 of 4	4.20	Up
Head	15 ± 2	4 of 4	1.00	None
Eye	8 ± 2	1 of 4	0.58	None
Thoracicoabdominal ganglion	39 ± 6	4 of 4	2.60	Up
Salivary gland	13 ± 4	0 of 4	0.88	None
Crop	7 ± 1	1 of 4	0.50	Down
Midgut	12 ± 1	3 of 4	0.80	None
Tubule	5 ± 1	0 of 4	0.40	Down
Hindgut	6 ± 1	0 of 4	0.40	Down
Heart	4 ± 1	0 of 4	0.32	Down
Fat body	9 ± 3	2 of 4	0.64	None
Ovary	6 ± 2	2 of 4	0.50	Down
Testis	48 ± 5	4 of 4	3.20	Up
Male accessory glands	3 ± 0	0 of 4	0.20	Down
Virgin spermatheca	9 ± 0	0 of 4	0.60	Down
Mated spermatheca	6 ± 2	0 of 4	0.41	Down
Adult carcass	10 ± 3	1 of 4	0.70	None
Larval CNS	12 ± 3	4 of 4	0.83	None
Larval Salivary gland	8 ± 1	0 of 4	0.57	Down
Larval midgut	8 ± 1	2 of 4	0.53	Down
Larval tubule	7 ± 1	1 of 4	0.50	Down
Larval hindgut	5 ± 0	0 of 4	0.35	Down
Larval fat body	12 ± 2	0 of 4	0.80	None
Larval trachea	3 ± 2	0 of 4	0.20	Down
Larval carcass	9 ± 2	2 of 4	0.62	None
S2 cells (growing)	5 ± 0	3 of 4	0.37	Down
Whole fly	15 ± 1	4 of 4

MKP-like (CG10089):

Annotation Number : CG10089
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036369
Gbrowse : chr3L:13461113-13467643 (-) // 100.0 //
Probeset : 1633800_s_at
Accessions : protein= NP_648654; /// NP_729907; /// NP_729908; /// NP_729909;, nucleotide= NM_140397; /// NM_168548; /// NM_168549; /// NM_168550;
Interpro : 0008138 // protein tyrosine/serine/threonine phosphatase activity // inferred from electronic annotation /// 0008138 //
FlyMine data for FBgn0036369.
BDGP gene expression has embryonic in situ data for CG10089: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0036369 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	2 of 4	0.00	Down
Head	8 ± 2	1 of 4	0.00	Down
Eye	3 ± 1	0 of 4	0.02	Down
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.00	Down
Salivary gland	4 ± 1	0 of 4	0.02	Down
Crop	11 ± 0	4 of 4	0.10	Down
Midgut	6 ± 2	1 of 4	0.00	Down
Tubule	4 ± 1	0 of 4	0.00	Down
Hindgut	6 ± 2	0 of 4	0.00	Down
Heart	4 ± 0	2 of 4	0.02	Down
Fat body	4 ± 4	0 of 4	0.02	Down
Ovary	22 ± 5	4 of 4	0.10	Down
Testis	1824 ± 15	4 of 4	8.10	Up
Male accessory glands	8 ± 1	1 of 4	0.00	Down
Virgin spermatheca	3 ± 1	0 of 4	0.01	Down
Mated spermatheca	3 ± 2	0 of 4	0.01	Down
Adult carcass	7 ± 2	0 of 4	0.00	Down
Larval CNS	4 ± 0	3 of 4	0.02	Down
Larval Salivary gland	3 ± 1	0 of 4	0.01	Down
Larval midgut	4 ± 1	0 of 4	0.02	Down
Larval tubule	4 ± 0	0 of 4	0.00	Down
Larval hindgut	8 ± 0	3 of 4	0.04	Down
Larval fat body	192 ± 101	4 of 4	0.90	None
Larval trachea	16 ± 10	4 of 4	0.07	Down
Larval carcass	5 ± 1	0 of 4	0.02	Down
S2 cells (growing)	1 ± 0	0 of 4	0.01	Down
Whole fly	224 ± 21	4 of 4

Looking for FBgn0036369. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720