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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036372 through 18771 annotations produced 1 hits



Debrin-like (CG10083):

Annotation Number : CG10083
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036372
Gbrowse : chr3L:13476632-13479398 (-) // 100.0 //
Probeset : 1633108_at
Accessions : protein= NP_648657;, nucleotide= NM_140400;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic ann
Interpro : 0003779 // actin binding // inferred by curator /// 0003779 // actin binding // inferred from electronic annotation ///
FlyMine data for FBgn0036372.
BioGrid reports that CG10083 interacts with CG18069 .
TRiP has 1 RNAi stocks for FBgn0036372 available for purchase.
VDRC has 2 RNAi stocks for FBgn0036372 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain279 64 of 4 1.20Up
Head161 34 of 4 0.70Down
Eye194 34 of 4 0.84None
Thoracicoabdominal ganglion248 34 of 4 1.10None
Salivary gland138 114 of 4 0.60Down
Crop174 64 of 4 0.80Down
Midgut480 274 of 4 2.10Up
Tubule330 134 of 4 1.40Up
Hindgut159 24 of 4 0.70Down
Heart90 44 of 4 0.39Down
Fat body96 144 of 4 0.42Down
Ovary537 24 of 4 2.30Up
Testis77 24 of 4 0.30Down
Male accessory glands60 44 of 4 0.30Down
Virgin spermatheca106 74 of 4 0.46Down
Mated spermatheca94 24 of 4 0.41Down
Adult carcass86 24 of 4 0.40Down
Larval CNS433 144 of 4 1.87Up
Larval Salivary gland169 54 of 4 0.73Down
Larval midgut765 154 of 4 3.31Up
Larval tubule1061 174 of 4 4.60Up
Larval hindgut431 354 of 4 1.87Up
Larval fat body269 264 of 4 1.20None
Larval trachea234 184 of 4 1.01None
Larval carcass255 174 of 4 1.10None
S2 cells (growing)252 84 of 4 1.09None
Whole fly231 134 of 4

Looking for FBgn0036372. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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