FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036376 through 18771 annotations produced 1 hits

(CG10743):

Annotation Number : CG10743
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036376
Gbrowse : chr3L:13506353-13509376 (+) // 100.0 //
Probeset : 1627677_s_at
Accessions : protein= NP_648661; /// NP_729920;, nucleotide= NM_140404; /// NM_168556;
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008268 // receptor signaling protein tyrosine kina
FlyMine data for FBgn0036376.
BioGrid reports that CG10743 interacts with CG9754 CG17244 .
TRiP has 1 RNAi stocks for FBgn0036376 available for purchase.
VDRC has 3 RNAi stocks for FBgn0036376 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	134 ± 2	4 of 4	0.50	Down
Head	176 ± 5	4 of 4	0.70	Down
Eye	163 ± 4	4 of 4	0.65	Down
Thoracicoabdominal ganglion	141 ± 3	4 of 4	0.60	Down
Salivary gland	253 ± 5	4 of 4	1.00	None
Crop	412 ± 4	4 of 4	1.60	Up
Midgut	369 ± 10	4 of 4	1.50	Up
Tubule	304 ± 12	4 of 4	1.20	Up
Hindgut	307 ± 11	4 of 4	1.20	Up
Heart	162 ± 8	4 of 4	0.64	Down
Fat body	169 ± 11	4 of 4	0.67	Down
Ovary	464 ± 8	4 of 4	1.80	Up
Testis	138 ± 4	4 of 4	0.50	Down
Male accessory glands	189 ± 7	4 of 4	0.70	Down
Virgin spermatheca	244 ± 20	4 of 4	0.97	None
Mated spermatheca	250 ± 9	4 of 4	0.99	None
Adult carcass	204 ± 7	4 of 4	0.80	Down
Larval CNS	218 ± 12	4 of 4	0.86	Down
Larval Salivary gland	290 ± 11	4 of 4	1.15	Up
Larval midgut	499 ± 21	4 of 4	1.97	Up
Larval tubule	261 ± 7	4 of 4	1.00	None
Larval hindgut	339 ± 11	4 of 4	1.34	Up
Larval fat body	217 ± 8	4 of 4	0.90	Down
Larval trachea	355 ± 11	4 of 4	1.40	Up
Larval carcass	223 ± 9	4 of 4	0.88	Down
S2 cells (growing)	397 ± 3	4 of 4	1.57	Up
Whole fly	253 ± 6	4 of 4

Looking for FBgn0036376. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720