FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036411 through 18771 annotations produced 1 hits

Sox21a (Sox21a):

Annotation Number : CG7345
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036411
Gbrowse : chr3L:14097353-14100174 (-) // 100.0 //
Probeset : 1624459_at
Accessions : protein= NP_648694;, nucleotide= NM_140437;
Pathway : engulfment // inferred from mutant phenotype /// 0045449 // regulation of transcription // inferred from sequence or st
Interpro : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
FlyMine data for FBgn0036411.
Homophila reports that CG7345 is a close match (2e-16) to human gene SOX18;HLTS (NP_060889), a gene associated with Hypotrichosis-lymphedema-telangiectasia syndrome, 607823 (3).
TRiP has 1 RNAi stocks for FBgn0036411 available for purchase.
VDRC has 2 RNAi stocks for FBgn0036411 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 1	1 of 4	0.60	Down
Head	18 ± 2	1 of 4	0.80	None
Eye	4 ± 1	0 of 4	0.21	Down
Thoracicoabdominal ganglion	19 ± 3	1 of 4	0.80	None
Salivary gland	19 ± 4	0 of 4	0.81	None
Crop	13 ± 2	0 of 4	0.60	Down
Midgut	43 ± 3	4 of 4	1.90	Up
Tubule	10 ± 1	0 of 4	0.50	Down
Hindgut	16 ± 2	0 of 4	0.70	None
Heart	6 ± 1	0 of 4	0.28	Down
Fat body	9 ± 5	0 of 4	0.39	Down
Ovary	12 ± 1	0 of 4	0.50	Down
Testis	12 ± 1	0 of 4	0.50	Down
Male accessory glands	9 ± 3	0 of 4	0.40	Down
Virgin spermatheca	9 ± 1	0 of 4	0.41	Down
Mated spermatheca	10 ± 1	3 of 4	0.43	Down
Adult carcass	13 ± 4	0 of 4	0.60	None
Larval CNS	20 ± 2	1 of 4	0.85	Down
Larval Salivary gland	16 ± 1	0 of 4	0.68	Down
Larval midgut	35 ± 4	3 of 4	1.49	None
Larval tubule	8 ± 2	0 of 4	0.30	Down
Larval hindgut	14 ± 1	0 of 4	0.63	Down
Larval fat body	5 ± 1	0 of 4	0.20	Down
Larval trachea	11 ± 4	0 of 4	0.48	Down
Larval carcass	17 ± 1	1 of 4	0.76	Down
S2 cells (growing)	19 ± 2	0 of 4	0.81	None
Whole fly	23 ± 1	0 of 4

Looking for FBgn0036411. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720