Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036442 through 18771 annotations produced 1 hits



(CG13473):

Annotation Number : CG13473
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036442
Gbrowse : chr3L:14721939-14722359 (+) // 100.0 //
Probeset : 1639158_at
Accessions : protein= NP_648717;, nucleotide= NM_140460;
Interpro : 0015036 // disulfide oxidoreductase activity // inferred from sequence or structural similarity
FlyMine data for FBgn0036442.
VDRC has 3 RNAi stocks for FBgn0036442 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.10Down
Head2 ± 10 of 4 0.00Down
Eye3 ± 10 of 4 0.07Down
Thoracicoabdominal ganglion3 ± 10 of 4 0.10Down
Salivary gland4 ± 10 of 4 0.09Down
Crop3 ± 10 of 4 0.10Down
Midgut1 ± 00 of 4 0.00Down
Tubule2 ± 00 of 4 0.10Down
Hindgut5 ± 10 of 4 0.10Down
Heart0 ± 00 of 4 0.02Down
Fat body3 ± 00 of 4 0.06Down
Ovary2 ± 10 of 4 0.10Down
Testis607 ± 184 of 412.10Up
Male accessory glands1 ± 00 of 4 0.00Down
Virgin spermatheca1 ± 00 of 4 0.04Down
Mated spermatheca3 ± 10 of 4 0.06Down
Adult carcass5 ± 10 of 4 0.10Down
Larval CNS2 ± 10 of 4 0.04Down
Larval Salivary gland2 ± 10 of 4 0.05Down
Larval midgut1 ± 00 of 4 0.03Down
Larval tubule2 ± 10 of 4 0.00Down
Larval hindgut4 ± 10 of 4 0.09Down
Larval fat body39 ± 213 of 4 0.80None
Larval trachea3 ± 21 of 4 0.07Down
Larval carcass6 ± 10 of 4 0.12Down
S2 cells (growing)1 ± 00 of 4 0.03Down
Whole fly50 ± 04 of 4

Looking for FBgn0036442. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime