FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036446 through 18771 annotations produced 1 hits

March 2006 (FlyBase/BDGP 5.3) (chr3L:14755177-14760812 (+) // 100.0 //):

Annotation Number : CG9384
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse :
Probeset : 1635035_at
Accessions : protein= EC:2.4.1.145, nucleotide=
Interpro : 0005975 // carbohydrate metabolic process // inferred from electronic annotation

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	446 ± 9	4 of 4	4.80	Up
Head	226 ± 10	4 of 4	2.40	Up
Eye	236 ± 14	4 of 4	2.55	Up
Thoracicoabdominal ganglion	425 ± 18	4 of 4	4.60	Up
Salivary gland	112 ± 4	4 of 4	1.21	Up
Crop	243 ± 3	4 of 4	2.60	Up
Midgut	63 ± 4	4 of 4	0.70	Down
Tubule	48 ± 2	4 of 4	0.50	Down
Hindgut	514 ± 5	4 of 4	5.50	Up
Heart	226 ± 4	4 of 4	2.44	Up
Fat body	173 ± 10	4 of 4	1.87	Up
Ovary	72 ± 2	4 of 4	0.80	Down
Testis	25 ± 2	4 of 4	0.30	Down
Male accessory glands	77 ± 5	4 of 4	0.80	None
Virgin spermatheca	111 ± 9	4 of 4	1.20	None
Mated spermatheca	127 ± 11	4 of 4	1.38	Up
Adult carcass	153 ± 9	4 of 4	1.70	Up
Larval CNS	281 ± 25	4 of 4	3.03	Up
Larval Salivary gland	111 ± 7	4 of 4	1.20	None
Larval midgut	80 ± 5	4 of 4	0.86	None
Larval tubule	59 ± 1	4 of 4	0.60	Down
Larval hindgut	311 ± 14	4 of 4	3.36	Up
Larval fat body	64 ± 5	4 of 4	0.70	Down
Larval trachea	168 ± 13	4 of 4	1.81	Up
Larval carcass	132 ± 0	4 of 4	1.42	Up
S2 cells (growing)	150 ± 3	4 of 4	1.62	Up
Whole fly	92 ± 5	4 of 4

Looking for FBgn0036446. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720