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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036466 through 18771 annotations produced 1 hits



(CG18581):

Annotation Number : CG18581
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036466
Gbrowse : chr3L:15042795-15043299 (-) // 100.0 //
Probeset : 1623713_at
Accessions : protein= NP_648736;, nucleotide= NM_140479;
FlyMine data for FBgn0036466.
VDRC has 4 RNAi stocks for FBgn0036466 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 11 of 4 0.50None
Head1 ± 00 of 4 0.40None
Eye2 ± 10 of 4 0.71None
Thoracicoabdominal ganglion1 ± 10 of 4 0.40None
Salivary gland333 ± 244 of 483.39Up
Crop8 ± 12 of 4 2.10None
Midgut1 ± 00 of 4 0.40None
Tubule3 ± 00 of 4 0.80None
Hindgut2 ± 10 of 4 0.50None
Heart1 ± 10 of 4 0.49None
Fat body2 ± 10 of 4 0.52None
Ovary1 ± 00 of 4 0.30None
Testis3 ± 11 of 4 0.90None
Male accessory glands5 ± 22 of 4 1.40None
Virgin spermatheca1 ± 00 of 4 0.44None
Mated spermatheca2 ± 00 of 4 0.66None
Adult carcass6 ± 10 of 4 1.60None
Larval CNS1 ± 10 of 4 0.39None
Larval Salivary gland1454 ± 1444 of 4363.69Up
Larval midgut1 ± 00 of 4 0.38None
Larval tubule2 ± 10 of 4 0.60None
Larval hindgut1 ± 00 of 4 0.45None
Larval fat body5 ± 10 of 4 1.40None
Larval trachea3 ± 10 of 4 0.81None
Larval carcass2 ± 01 of 4 0.63None
S2 cells (growing)1 ± 00 of 4 0.38None
Whole fly4 ± 12 of 4

Looking for FBgn0036466. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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