FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036476 through 18771 annotations produced 1 hits

(CG6945):

Annotation Number : CG6945
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036476
Gbrowse : chr3L:15084103-15087819 (-) // 100.0 //
Probeset : 1630923_at
Accessions : protein= NP_648745;, nucleotide= NM_140488;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036476.
BDGP gene expression has embryonic in situ data for CG6945: 4 pix of staining in 1 body parts.
BioGrid reports that CG6945 interacts with CG7111 CG7417 CG8907 CG8927 CG9083 CG9411 CG9911 .
VDRC has 3 RNAi stocks for FBgn0036476 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	54 ± 3	4 of 4	0.90	None
Head	45 ± 3	4 of 4	0.70	Down
Eye	35 ± 1	4 of 4	0.58	Down
Thoracicoabdominal ganglion	67 ± 4	4 of 4	1.10	None
Salivary gland	64 ± 5	4 of 4	1.06	None
Crop	62 ± 5	4 of 4	1.00	None
Midgut	49 ± 2	4 of 4	0.80	None
Tubule	32 ± 2	3 of 4	0.50	Down
Hindgut	48 ± 5	4 of 4	0.80	None
Heart	20 ± 0	4 of 4	0.33	Down
Fat body	40 ± 4	3 of 4	0.66	Down
Ovary	127 ± 4	4 of 4	2.10	Up
Testis	106 ± 6	4 of 4	1.80	Up
Male accessory glands	44 ± 3	4 of 4	0.70	Down
Virgin spermatheca	34 ± 3	4 of 4	0.57	Down
Mated spermatheca	45 ± 2	4 of 4	0.74	Down
Adult carcass	45 ± 3	4 of 4	0.70	Down
Larval CNS	93 ± 7	4 of 4	1.54	Up
Larval Salivary gland	66 ± 3	4 of 4	1.09	None
Larval midgut	50 ± 5	4 of 4	0.82	None
Larval tubule	46 ± 1	4 of 4	0.80	Down
Larval hindgut	55 ± 1	4 of 4	0.91	None
Larval fat body	56 ± 8	3 of 4	0.90	None
Larval trachea	66 ± 4	4 of 4	1.10	None
Larval carcass	85 ± 4	4 of 4	1.41	Up
S2 cells (growing)	99 ± 2	4 of 4	1.64	Up
Whole fly	60 ± 4	4 of 4

Looking for FBgn0036476. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720