Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036480 through 18771 annotations produced 1 hits



CG17081 (Cep135):

Annotation Number : CG17081
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036480
Gbrowse : chr3L:15109838-15121125 (+) // 100.0 //
Probeset : 1623375_at
Accessions : protein= NP_648749;, nucleotide= NM_140492;
Pathway : 0005813 // centrosome // inferred from direct assay /// 0005814 // centriole // inferred from direct assay /// 0005932 /
FlyMine data for FBgn0036480.
BDGP gene expression has embryonic in situ data for CG17081: 4 pix of staining in 1 body parts.
BioGrid reports that CG17081 interacts with CG2224 CG7744 CG8457 .
VDRC has 2 RNAi stocks for FBgn0036480 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain15 04 of 4 0.50Down
Head14 24 of 4 0.40Down
Eye29 14 of 4 0.93None
Thoracicoabdominal ganglion20 14 of 4 0.70Down
Salivary gland4 10 of 4 0.14Down
Crop35 34 of 4 1.10None
Midgut3 10 of 4 0.10Down
Tubule9 02 of 4 0.30Down
Hindgut17 24 of 4 0.60Down
Heart6 11 of 4 0.20Down
Fat body8 22 of 4 0.28Down
Ovary61 34 of 4 2.00Up
Testis152 64 of 4 4.90Up
Male accessory glands0 00 of 4 0.00Down
Virgin spermatheca3 10 of 4 0.11Down
Mated spermatheca2 10 of 4 0.07Down
Adult carcass5 20 of 4 0.20Down
Larval CNS89 84 of 4 2.85Up
Larval Salivary gland4 11 of 4 0.14Down
Larval midgut8 01 of 4 0.28Down
Larval tubule18 14 of 4 0.60Down
Larval hindgut18 14 of 4 0.59Down
Larval fat body26 101 of 4 0.80None
Larval trachea29 24 of 4 0.93None
Larval carcass25 44 of 4 0.80None
S2 cells (growing)48 24 of 4 1.54Up
Whole fly31 14 of 4

Looking for FBgn0036480. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime