FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036487 through 18771 annotations produced 1 hits

(Prp31):

Annotation Number : CG6876
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036487
Gbrowse : chr3L:15152182-15154238 (+) // 100.0 //
Probeset : 1633113_at
Accessions : protein= NP_648756;, nucleotide= NM_140499;
Pathway : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred from sequence or structural similarity"
FlyMine data for FBgn0036487.
BDGP gene expression has embryonic in situ data for CG6876: 4 pix of staining in 1 body parts.
Homophila reports that CG6876 is a close match (2e-143) to human gene PRPF31;PRP31 (NP_056444), a gene associated with Retinitis pigmentosa-11, 600138 (3).
VDRC has 2 RNAi stocks for FBgn0036487 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	150 ± 5	4 of 4	1.20	Up
Head	102 ± 3	4 of 4	0.80	Down
Eye	107 ± 4	4 of 4	0.87	None
Thoracicoabdominal ganglion	146 ± 8	4 of 4	1.20	None
Salivary gland	123 ± 4	4 of 4	1.00	None
Crop	120 ± 8	4 of 4	1.00	None
Midgut	82 ± 3	4 of 4	0.70	Down
Tubule	120 ± 3	4 of 4	1.00	None
Hindgut	131 ± 0	4 of 4	1.10	None
Heart	79 ± 1	4 of 4	0.64	Down
Fat body	66 ± 3	4 of 4	0.54	Down
Ovary	169 ± 3	4 of 4	1.40	Up
Testis	118 ± 4	4 of 4	1.00	None
Male accessory glands	79 ± 4	4 of 4	0.60	Down
Virgin spermatheca	106 ± 4	4 of 4	0.86	None
Mated spermatheca	111 ± 1	4 of 4	0.90	None
Adult carcass	65 ± 4	4 of 4	0.50	Down
Larval CNS	269 ± 20	4 of 4	2.17	Up
Larval Salivary gland	159 ± 10	4 of 4	1.29	Up
Larval midgut	50 ± 3	4 of 4	0.41	Down
Larval tubule	110 ± 4	4 of 4	0.90	None
Larval hindgut	102 ± 4	4 of 4	0.82	Down
Larval fat body	92 ± 3	4 of 4	0.70	Down
Larval trachea	139 ± 2	4 of 4	1.12	None
Larval carcass	94 ± 9	4 of 4	0.76	Down
S2 cells (growing)	205 ± 4	4 of 4	1.65	Up
Whole fly	124 ± 6	4 of 4

Looking for FBgn0036487. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720