Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036489 through 18771 annotations produced 1 hits



(CG7011):

Annotation Number : CG7011
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036489
Gbrowse : chr3L:15153968-15156724 (-) // 100.0 //
Probeset : 1636544_at
Accessions : protein= NP_648758;, nucleotide= NM_140501;
Pathway : 0030134 // ER to Golgi transport vesicle // inferred from sequence or structural similarity
FlyMine data for FBgn0036489.
BDGP gene expression has embryonic in situ data for CG7011: 12 pix of staining in 2 body parts.
BioGrid reports that CG7011 interacts with CG9610 CG9696 .
VDRC has 3 RNAi stocks for FBgn0036489 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain116 ± 24 of 4 0.90None
Head110 ± 74 of 4 0.90None
Eye72 ± 24 of 4 0.57Down
Thoracicoabdominal ganglion102 ± 44 of 4 0.80Down
Salivary gland440 ± 534 of 4 3.44Up
Crop98 ± 34 of 4 0.80Down
Midgut35 ± 24 of 4 0.30Down
Tubule72 ± 74 of 4 0.60Down
Hindgut78 ± 24 of 4 0.60Down
Heart114 ± 94 of 4 0.89None
Fat body134 ± 294 of 4 1.05None
Ovary204 ± 64 of 4 1.60Up
Testis38 ± 24 of 4 0.30Down
Male accessory glands562 ± 354 of 4 4.40Up
Virgin spermatheca191 ± 44 of 4 1.50Up
Mated spermatheca227 ± 94 of 4 1.78Up
Adult carcass103 ± 34 of 4 0.80Down
Larval CNS129 ± 134 of 4 1.01None
Larval Salivary gland782 ± 224 of 4 6.10Up
Larval midgut37 ± 14 of 4 0.29Down
Larval tubule76 ± 44 of 4 0.60Down
Larval hindgut108 ± 34 of 4 0.84Down
Larval fat body141 ± 144 of 4 1.10None
Larval trachea202 ± 254 of 4 1.58Up
Larval carcass199 ± 164 of 4 1.56Up
S2 cells (growing)155 ± 34 of 4 1.21Up
Whole fly128 ± 54 of 4

Looking for FBgn0036489. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime