Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036500 through 18771 annotations produced 1 hits



(CG7275):

Annotation Number : CG7275
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036500
Gbrowse : chr3L:15492063-15493661 (+) // 100.0 //
Probeset : 1640460_at
Accessions : protein= NP_648767;, nucleotide= NM_140510;
Pathway : engulfment // inferred from mutant phenotype"
FlyMine data for FBgn0036500.
BDGP gene expression has embryonic in situ data for CG7275: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0036500 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain82 ± 34 of 4 0.70Down
Head93 ± 54 of 4 0.80Down
Eye80 ± 54 of 4 0.69Down
Thoracicoabdominal ganglion93 ± 44 of 4 0.80Down
Salivary gland168 ± 134 of 4 1.46Up
Crop136 ± 34 of 4 1.20Up
Midgut113 ± 114 of 4 1.00None
Tubule88 ± 94 of 4 0.80Down
Hindgut105 ± 54 of 4 0.90None
Heart95 ± 74 of 4 0.83None
Fat body106 ± 34 of 4 0.92None
Ovary173 ± 14 of 4 1.50Up
Testis61 ± 54 of 4 0.50Down
Male accessory glands255 ± 54 of 4 2.20Up
Virgin spermatheca88 ± 54 of 4 0.77Down
Mated spermatheca109 ± 54 of 4 0.94None
Adult carcass118 ± 64 of 4 1.00None
Larval CNS165 ± 134 of 4 1.43Up
Larval Salivary gland126 ± 44 of 4 1.09None
Larval midgut56 ± 54 of 4 0.49Down
Larval tubule63 ± 34 of 4 0.60Down
Larval hindgut81 ± 34 of 4 0.70Down
Larval fat body105 ± 44 of 4 0.90None
Larval trachea200 ± 134 of 4 1.73Up
Larval carcass97 ± 74 of 4 0.85None
S2 cells (growing)172 ± 84 of 4 1.50Up
Whole fly115 ± 54 of 4

Looking for FBgn0036500. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime