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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036509 through 18771 annotations produced 1 hits



argonaute 2 /// (AGO2 /// CG7739):

Annotation Number : CG7739
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036509
Gbrowse : chr3L:15553832-15556163 (-) // 100.0 //
Probeset : 1637601_at
Accessions : protein= NP_648776;, nucleotide= NM_140519;
FlyMine data for FBgn0036509.
BDGP gene expression has embryonic in situ data for CG7739: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0036509 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain640 ± 134 of 4 3.40Up
Head450 ± 144 of 4 2.40Up
Eye603 ± 224 of 4 3.23Up
Thoracicoabdominal ganglion641 ± 284 of 4 3.40Up
Salivary gland642 ± 124 of 4 3.44Up
Crop309 ± 104 of 4 1.70Up
Midgut340 ± 94 of 4 1.80Up
Tubule270 ± 14 of 4 1.50Up
Hindgut352 ± 64 of 4 1.90Up
Heart348 ± 44 of 4 1.87Up
Fat body320 ± 154 of 4 1.72Up
Ovary159 ± 44 of 4 0.90Down
Testis168 ± 24 of 4 0.90Down
Male accessory glands549 ± 304 of 4 2.90Up
Virgin spermatheca329 ± 174 of 4 1.76Up
Mated spermatheca311 ± 84 of 4 1.67Up
Adult carcass294 ± 104 of 4 1.60Up
Larval CNS346 ± 204 of 4 1.86Up
Larval Salivary gland346 ± 214 of 4 1.86Up
Larval midgut404 ± 224 of 4 2.17Up
Larval tubule635 ± 204 of 4 3.40Up
Larval hindgut349 ± 94 of 4 1.87Up
Larval fat body358 ± 154 of 4 1.90Up
Larval trachea228 ± 274 of 4 1.23None
Larval carcass225 ± 244 of 4 1.21None
S2 cells (growing)596 ± 24 of 4 3.20Up
Whole fly186 ± 44 of 4

Looking for FBgn0036509. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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