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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036527 through 18771 annotations produced 1 hits



(CG7304):

Annotation Number : CG7304
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036527
Gbrowse : chr3L:15671332-15674570 (+) // 100.0 //
Probeset : 1635471_at
Accessions : protein= NP_648798; /// NP_996098;, nucleotide= NM_140541; /// NM_206376;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : "0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from sequence or structural similarity //
FlyMine data for FBgn0036527.
Homophila reports that CG7304 is a close match (3e-45) to human gene GALNT3;HFTC;HHS (NP_004473), a gene associated with Hyperostosis-hyperphosphatemia syndrome, 610233 (3);Tumoral calcinosis, hyperphosphatemic, familial, 211900 (3).
VDRC has 2 RNAi stocks for FBgn0036527 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.10None
Head1 ± 00 of 4 0.10None
Eye1 ± 00 of 4 0.18None
Thoracicoabdominal ganglion2 ± 20 of 4 0.30None
Salivary gland5 ± 30 of 4 0.66None
Crop0 ± 00 of 4 0.10None
Midgut1 ± 00 of 4 0.20None
Tubule0 ± 00 of 4 0.10Down
Hindgut0 ± 00 of 4 0.10None
Heart0 ± 00 of 4 0.06Down
Fat body0 ± 00 of 4 0.09None
Ovary0 ± 00 of 4 0.10Down
Testis0 ± 00 of 4 0.10Down
Male accessory glands747 ± 544 of 492.80Up
Virgin spermatheca0 ± 00 of 4 0.10None
Mated spermatheca0 ± 00 of 4 0.07Down
Adult carcass3 ± 00 of 4 0.40None
Larval CNS0 ± 00 of 4 0.10None
Larval Salivary gland3 ± 00 of 4 0.46None
Larval midgut0 ± 00 of 4 0.11None
Larval tubule2 ± 10 of 4 0.20None
Larval hindgut0 ± 00 of 4 0.08Down
Larval fat body1 ± 00 of 4 0.10None
Larval trachea0 ± 00 of 4 0.06Down
Larval carcass0 ± 00 of 4 0.06Down
S2 cells (growing)0 ± 00 of 4 0.11None
Whole fly8 ± 20 of 4

Looking for FBgn0036527. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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