Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036528 through 18771 annotations produced 1 hits



(CG7579):

Annotation Number : CG7579
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036528
Gbrowse : chr3L:15674768-15676397 (-) // 100.0 //
Probeset : 1634780_at
Accessions : protein= NP_648799;, nucleotide= NM_140542;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005794 // Golgi apparatus // inferred from electro
Interpro : "0004653 // polypeptide N-acetylgalactosaminyltransferase activity // inferred from sequence or structural similarity //
FlyMine data for FBgn0036528.
Homophila reports that CG7579 is a close match (4e-46) to human gene GALNT3;HFTC;HHS (NP_004473), a gene associated with Hyperostosis-hyperphosphatemia syndrome, 610233 (3);Tumoral calcinosis, hyperphosphatemic, familial, 211900 (3).
VDRC has 3 RNAi stocks for FBgn0036528 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.10Down
Head1 00 of 4 0.10Down
Eye1 00 of 4 0.17Down
Thoracicoabdominal ganglion2 00 of 4 0.20Down
Salivary gland5 20 of 4 0.52None
Crop5 00 of 4 0.50Down
Midgut4 01 of 4 0.40Down
Tubule4 00 of 4 0.40Down
Hindgut3 11 of 4 0.30Down
Heart2 00 of 4 0.21Down
Fat body4 21 of 4 0.39Down
Ovary2 00 of 4 0.20Down
Testis3 00 of 4 0.30Down
Male accessory glands1121 604 of 4101.50Up
Virgin spermatheca3 00 of 4 0.28Down
Mated spermatheca4 11 of 4 0.44Down
Adult carcass8 31 of 4 0.80None
Larval CNS2 10 of 4 0.20Down
Larval Salivary gland1 00 of 4 0.16Down
Larval midgut4 11 of 4 0.45Down
Larval tubule2 00 of 4 0.30Down
Larval hindgut2 10 of 4 0.25Down
Larval fat body6 11 of 4 0.60None
Larval trachea2 20 of 4 0.24Down
Larval carcass2 00 of 4 0.22Down
S2 cells (growing)3 02 of 4 0.33Down
Whole fly11 14 of 4

Looking for FBgn0036528. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime