FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036544 through 18771 annotations produced 2 hits

SNF1-related (CG6114):

Annotation Number : S.C3L001985
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036544
Gbrowse : chr3L:15903600-15904341 (-) // 89.71 //
Probeset : 1623313_at
Accessions : protein= NP_648814;, nucleotide= NM_140557;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0036544.
TRiP has 1 RNAi stocks for FBgn0036544 available for purchase.
VDRC has 3 RNAi stocks for FBgn0036544 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 2	3 of 4	4.00	Up
Head	5 ± 2	1 of 4	2.50	None
Eye	6 ± 1	0 of 4	2.83	Up
Thoracicoabdominal ganglion	4 ± 1	0 of 4	1.80	None
Salivary gland	6 ± 3	0 of 4	2.71	None
Crop	4 ± 2	0 of 4	1.70	None
Midgut	4 ± 1	0 of 4	1.90	None
Tubule	3 ± 0	0 of 4	1.40	Up
Hindgut	3 ± 1	0 of 4	1.30	None
Heart	3 ± 0	0 of 4	1.43	None
Fat body	9 ± 4	2 of 4	4.02	None
Ovary	0 ± 0	0 of 4	0.40	None
Testis	1 ± 1	0 of 4	0.80	None
Male accessory glands	8 ± 0	0 of 4	3.80	Up
Virgin spermatheca	2 ± 1	0 of 4	1.01	None
Mated spermatheca	1 ± 0	0 of 4	0.54	None
Adult carcass	6 ± 2	0 of 4	2.70	None
Larval CNS	2 ± 1	0 of 4	0.86	None
Larval Salivary gland	2 ± 1	0 of 4	1.17	None
Larval midgut	0 ± 0	0 of 4	0.32	None
Larval tubule	0 ± 0	0 of 4	0.30	None
Larval hindgut	3 ± 1	0 of 4	1.44	None
Larval fat body	1 ± 0	0 of 4	0.50	None
Larval trachea	1 ± 1	0 of 4	0.61	None
Larval carcass	0 ± 0	0 of 4	0.28	None
S2 cells (growing)	0 ± 0	0 of 4	0.28	None
Whole fly	2 ± 0	0 of 4

SNF1-related (CG6114):

Annotation Number : CG6114
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036544
Gbrowse : chr3L:15893249-15902230 (-) // 100.0 //
Probeset : 1634134_at
Accessions : protein= NP_648814;, nucleotide= NM_140557;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0036544.
Homophila reports that CG6114 is a close match (9e-11) to human gene AUTS9;MET (NP_000236), a gene associated with Hepatocellular carcinoma, childhood type, 114550 (3);Renal cell carcinoma, papillary, familial and sporadic, 605074 (3);{Autism, suseptibility to, 9}, 611015 (3).
TRiP has 1 RNAi stocks for FBgn0036544 available for purchase.
VDRC has 3 RNAi stocks for FBgn0036544 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	356 ± 9	4 of 4	37.00	Up
Head	69 ± 3	4 of 4	7.20	Up
Eye	186 ± 12	4 of 4	19.39	Up
Thoracicoabdominal ganglion	384 ± 18	4 of 4	40.00	Up
Salivary gland	11 ± 3	0 of 4	1.19	None
Crop	6 ± 1	0 of 4	0.60	None
Midgut	0 ± 0	0 of 4	0.10	Down
Tubule	6 ± 0	0 of 4	0.70	Down
Hindgut	3 ± 1	0 of 4	0.40	Down
Heart	3 ± 0	0 of 4	0.34	Down
Fat body	19 ± 8	4 of 4	2.02	None
Ovary	3 ± 0	0 of 4	0.30	Down
Testis	1 ± 0	0 of 4	0.10	Down
Male accessory glands	2 ± 0	0 of 4	0.20	Down
Virgin spermatheca	25 ± 2	4 of 4	2.68	Up
Mated spermatheca	39 ± 11	4 of 4	4.05	None
Adult carcass	5 ± 1	0 of 4	0.60	None
Larval CNS	289 ± 22	4 of 4	30.06	Up
Larval Salivary gland	4 ± 1	0 of 4	0.46	Down
Larval midgut	1 ± 0	0 of 4	0.10	Down
Larval tubule	5 ± 2	1 of 4	0.60	None
Larval hindgut	2 ± 1	0 of 4	0.30	Down
Larval fat body	3 ± 2	0 of 4	0.40	None
Larval trachea	5 ± 7	1 of 4	0.57	None
Larval carcass	2 ± 1	0 of 4	0.28	Down
S2 cells (growing)	2 ± 0	0 of 4	0.23	Down
Whole fly	9 ± 1	3 of 4

Looking for FBgn0036544. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720