FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036545 through 18771 annotations produced 1 hits

GXIVsPLA2 (GXIVsPLA2):

Annotation Number : CG17035
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036545
Gbrowse : chr3L:15948274-15949355 (+) // 100.0 //
Probeset : 1625027_a_at
Accessions : protein= NP_001137957; /// NP_648815;, nucleotide= NM_001144485; /// NM_140558;
Pathway : 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // non-tracea
Interpro : 0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0004623 // phospholipase A2 activity //
FlyMine data for FBgn0036545.
BDGP gene expression has embryonic in situ data for GXIVsPLA2: 8 pix of staining in 2 body parts.
TRiP has 1 RNAi stocks for FBgn0036545 available for purchase.
VDRC has 3 RNAi stocks for FBgn0036545 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	164 ± 4	4 of 4	1.50	Up
Head	141 ± 7	4 of 4	1.30	Up
Eye	200 ± 8	4 of 4	1.87	Up
Thoracicoabdominal ganglion	131 ± 4	4 of 4	1.20	Up
Salivary gland	228 ± 10	4 of 4	2.12	Up
Crop	209 ± 8	4 of 4	2.00	Up
Midgut	61 ± 3	4 of 4	0.60	Down
Tubule	167 ± 7	4 of 4	1.60	Up
Hindgut	98 ± 2	4 of 4	0.90	None
Heart	220 ± 3	4 of 4	2.05	Up
Fat body	71 ± 8	4 of 4	0.67	Down
Ovary	158 ± 1	4 of 4	1.50	Up
Testis	53 ± 1	4 of 4	0.50	Down
Male accessory glands	607 ± 33	4 of 4	5.60	Up
Virgin spermatheca	32 ± 1	4 of 4	0.30	Down
Mated spermatheca	38 ± 5	4 of 4	0.35	Down
Adult carcass	147 ± 6	4 of 4	1.40	Up
Larval CNS	97 ± 5	4 of 4	0.91	None
Larval Salivary gland	171 ± 7	4 of 4	1.59	Up
Larval midgut	30 ± 3	4 of 4	0.28	Down
Larval tubule	105 ± 4	4 of 4	1.00	None
Larval hindgut	51 ± 1	4 of 4	0.47	Down
Larval fat body	93 ± 0	4 of 4	0.90	None
Larval trachea	165 ± 12	4 of 4	1.54	Up
Larval carcass	100 ± 5	4 of 4	0.93	None
S2 cells (growing)	374 ± 4	4 of 4	3.48	Up
Whole fly	107 ± 7	4 of 4

Looking for FBgn0036545. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720