Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036547 through 18771 annotations produced 1 hits



(CG17032):

Annotation Number : CG17032
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036547
Gbrowse : chr3L:15951942-15953710 (+) // 100.0 //
Probeset : 1639353_at
Accessions : protein= NP_648817;, nucleotide= NM_140560;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036547.
BDGP gene expression has embryonic in situ data for CG17032: 24 pix of staining in 14 body parts.
BioGrid reports that CG17032 interacts with CG5450 CG6447 CG6478 .
VDRC has 2 RNAi stocks for FBgn0036547 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain28 ± 24 of 4 0.30Down
Head271 ± 214 of 4 3.10Up
Eye193 ± 154 of 4 2.23Up
Thoracicoabdominal ganglion34 ± 33 of 4 0.40Down
Salivary gland20 ± 20 of 4 0.23Down
Crop542 ± 124 of 4 6.30Up
Midgut78 ± 24 of 4 0.90None
Tubule32 ± 23 of 4 0.40Down
Hindgut193 ± 154 of 4 2.20Up
Heart374 ± 114 of 4 4.32Up
Fat body736 ± 544 of 4 8.52Up
Ovary7 ± 00 of 4 0.10Down
Testis45 ± 34 of 4 0.50Down
Male accessory glands263 ± 154 of 4 3.00Up
Virgin spermatheca311 ± 244 of 4 3.60Up
Mated spermatheca626 ± 744 of 4 7.24Up
Adult carcass480 ± 254 of 4 5.60Up
Larval CNS132 ± 164 of 4 1.53Up
Larval Salivary gland31 ± 41 of 4 0.37Down
Larval midgut68 ± 94 of 4 0.79None
Larval tubule33 ± 13 of 4 0.40Down
Larval hindgut798 ± 524 of 4 9.23Up
Larval fat body129 ± 234 of 4 1.50None
Larval trachea910 ± 1044 of 410.53Up
Larval carcass1551 ± 1074 of 417.95Up
S2 cells (growing)29 ± 14 of 4 0.34Down
Whole fly86 ± 44 of 4

Looking for FBgn0036547. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime