FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036640 through 18771 annotations produced 1 hits

nuclear RNA export factor 2 (nxf2):

Annotation Number : CG4118
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036640
Gbrowse : chr3L:16569965-16573387 (-) // 99.82 //
Probeset : 1629074_a_at
Accessions : protein= NP_524111; /// NP_730179;, nucleotide= NM_079387; /// NM_168674;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005654 // nucleoplasm // inferred from direct assay /// 0
Interpro : 0003723 // RNA binding // inferred from electronic annotation
FlyMine data for FBgn0036640.
TRiP has 2 RNAi stocks for FBgn0036640 available for purchase.
VDRC has 1 RNAi stocks for FBgn0036640 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	11 ± 2	4 of 4	0.10	Down
Head	11 ± 3	3 of 4	0.10	Down
Eye	17 ± 1	4 of 4	0.22	Down
Thoracicoabdominal ganglion	12 ± 1	2 of 4	0.20	Down
Salivary gland	16 ± 2	1 of 4	0.22	Down
Crop	19 ± 2	3 of 4	0.20	Down
Midgut	16 ± 3	1 of 4	0.20	Down
Tubule	14 ± 1	0 of 4	0.20	Down
Hindgut	13 ± 1	3 of 4	0.20	Down
Heart	12 ± 0	4 of 4	0.16	Down
Fat body	16 ± 4	4 of 4	0.21	Down
Ovary	159 ± 3	4 of 4	2.00	Up
Testis	32 ± 2	4 of 4	0.40	Down
Male accessory glands	10 ± 2	0 of 4	0.10	Down
Virgin spermatheca	11 ± 2	3 of 4	0.14	Down
Mated spermatheca	13 ± 1	3 of 4	0.18	Down
Adult carcass	19 ± 2	2 of 4	0.20	Down
Larval CNS	65 ± 3	4 of 4	0.83	None
Larval Salivary gland	7 ± 3	1 of 4	0.10	Down
Larval midgut	10 ± 1	0 of 4	0.13	Down
Larval tubule	11 ± 2	0 of 4	0.10	Down
Larval hindgut	14 ± 0	2 of 4	0.19	Down
Larval fat body	23 ± 4	4 of 4	0.30	Down
Larval trachea	26 ± 5	4 of 4	0.34	Down
Larval carcass	25 ± 2	4 of 4	0.33	Down
S2 cells (growing)	80 ± 2	4 of 4	1.03	None
Whole fly	78 ± 5	4 of 4

Looking for FBgn0036640. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720