FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036643 through 18771 annotations produced 1 hits

syntaxin (Syx8):

Annotation Number : CG4109
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036643
Gbrowse : chr3L:16579326-16580199 (-) // 100.0 //
Probeset : 1623564_at
Accessions : protein= NP_524113;, nucleotide= NM_079389;
Pathway : 0005886 // plasma membrane // inferred from sequence or structural similarity
Interpro : 0005484 // SNAP receptor activity // inferred from sequence or structural similarity
FlyMine data for FBgn0036643.
BDGP gene expression has embryonic in situ data for Syx8: 8 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0036643 available for purchase.
VDRC has 4 RNAi stocks for FBgn0036643 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	192 ± 3	4 of 4	2.40	Up
Head	129 ± 10	4 of 4	1.60	Up
Eye	292 ± 15	4 of 4	3.65	Up
Thoracicoabdominal ganglion	139 ± 4	4 of 4	1.70	Up
Salivary gland	241 ± 19	4 of 4	3.01	Up
Crop	91 ± 4	4 of 4	1.10	None
Midgut	134 ± 9	4 of 4	1.70	Up
Tubule	127 ± 2	4 of 4	1.60	Up
Hindgut	144 ± 1	4 of 4	1.80	Up
Heart	155 ± 14	4 of 4	1.94	Up
Fat body	65 ± 10	4 of 4	0.82	None
Ovary	94 ± 4	4 of 4	1.20	None
Testis	56 ± 1	4 of 4	0.70	Down
Male accessory glands	142 ± 2	4 of 4	1.80	Up
Virgin spermatheca	108 ± 6	4 of 4	1.36	Up
Mated spermatheca	116 ± 9	4 of 4	1.46	Up
Adult carcass	83 ± 4	4 of 4	1.00	None
Larval CNS	71 ± 9	4 of 4	0.89	None
Larval Salivary gland	111 ± 7	4 of 4	1.39	Up
Larval midgut	91 ± 5	4 of 4	1.14	None
Larval tubule	143 ± 2	4 of 4	1.80	Up
Larval hindgut	86 ± 10	4 of 4	1.08	None
Larval fat body	93 ± 7	4 of 4	1.20	None
Larval trachea	86 ± 22	4 of 4	1.08	None
Larval carcass	49 ± 8	4 of 4	0.61	Down
S2 cells (growing)	145 ± 1	4 of 4	1.82	Up
Whole fly	80 ± 4	4 of 4

Looking for FBgn0036643. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720