Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036656 through 18771 annotations produced 1 hits



(CG13026):

Annotation Number : CG13026
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036656
Gbrowse : chr3L:16718806-16719272 (-) // 100.0 //
Probeset : 1625401_at
Accessions : protein= NP_648915;, nucleotide= NM_140658;
FlyMine data for FBgn0036656.
VDRC has 1 RNAi stocks for FBgn0036656 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 10 of 4 0.30Down
Head48 ± 54 of 4 1.90Up
Eye12 ± 20 of 4 0.49Down
Thoracicoabdominal ganglion8 ± 10 of 4 0.30Down
Salivary gland2 ± 00 of 4 0.09Down
Crop5 ± 10 of 4 0.20Down
Midgut7 ± 10 of 4 0.30Down
Tubule7 ± 10 of 4 0.30Down
Hindgut2 ± 10 of 4 0.10Down
Heart6 ± 21 of 4 0.28Down
Fat body7 ± 30 of 4 0.30Down
Ovary8 ± 10 of 4 0.30Down
Testis3 ± 00 of 4 0.10Down
Male accessory glands5 ± 10 of 4 0.20Down
Virgin spermatheca3 ± 10 of 4 0.14Down
Mated spermatheca6 ± 20 of 4 0.24Down
Adult carcass184 ± 304 of 4 7.40Up
Larval CNS3 ± 20 of 4 0.15Down
Larval Salivary gland4 ± 20 of 4 0.18Down
Larval midgut7 ± 20 of 4 0.32Down
Larval tubule5 ± 20 of 4 0.20Down
Larval hindgut4 ± 10 of 4 0.19Down
Larval fat body10 ± 31 of 4 0.40Down
Larval trachea7 ± 30 of 4 0.29Down
Larval carcass5 ± 10 of 4 0.20Down
S2 cells (growing)5 ± 10 of 4 0.23Down
Whole fly24 ± 23 of 4

Looking for FBgn0036656. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime