FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036666 through 18771 annotations produced 2 hits

erupted (TSG101):

Annotation Number : CG9712
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036666
Gbrowse : chr3L:16835398-16837686 (+) // 100.0 //
Probeset : 1640247_at
Accessions : protein= NP_524120;, nucleotide= NM_079396;
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical inter
FlyMine data for FBgn0036666.
BDGP gene expression has embryonic in situ data for TSG101: 11 pix of staining in 8 body parts.
Homophila reports that CG9712 is a close match (1e-92) to human gene TSG101 (NP_006283), a gene associated with Breast cancer (3).
TRiP has 2 RNAi stocks for FBgn0036666 available for purchase.
VDRC has 1 RNAi stocks for FBgn0036666 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	480 ± 4	4 of 4	1.50	Up
Head	340 ± 11	4 of 4	1.10	None
Eye	634 ± 14	4 of 4	1.96	Up
Thoracicoabdominal ganglion	559 ± 21	4 of 4	1.70	Up
Salivary gland	273 ± 18	4 of 4	0.84	None
Crop	372 ± 22	4 of 4	1.20	None
Midgut	309 ± 2	4 of 4	1.00	None
Tubule	769 ± 26	4 of 4	2.40	Up
Hindgut	324 ± 3	4 of 4	1.00	None
Heart	550 ± 32	4 of 4	1.70	Up
Fat body	234 ± 17	4 of 4	0.72	Down
Ovary	274 ± 13	4 of 4	0.80	None
Testis	1428 ± 8	4 of 4	4.40	Up
Male accessory glands	186 ± 12	4 of 4	0.60	Down
Virgin spermatheca	220 ± 9	4 of 4	0.68	Down
Mated spermatheca	199 ± 6	4 of 4	0.61	Down
Adult carcass	321 ± 10	4 of 4	1.00	None
Larval CNS	503 ± 23	4 of 4	1.55	Up
Larval Salivary gland	339 ± 19	4 of 4	1.05	None
Larval midgut	341 ± 23	4 of 4	1.05	None
Larval tubule	935 ± 37	4 of 4	2.90	Up
Larval hindgut	435 ± 31	4 of 4	1.34	Up
Larval fat body	545 ± 31	4 of 4	1.70	Up
Larval trachea	471 ± 21	4 of 4	1.45	Up
Larval carcass	278 ± 28	4 of 4	0.86	None
S2 cells (growing)	872 ± 20	4 of 4	2.70	Up
Whole fly	323 ± 17	4 of 4

NADH ubiquinone oxidoreductase 20 kDa /// erupted (CG9172 /// TSG101):

Annotation Number : CG9172
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030718
Gbrowse : chrX:15879876-15880791 (-) // 100.0 //
Probeset : 1636029_s_at
Accessions : protein= NP_573097; /// NP_727921;, nucleotide= NM_132869; /// NM_167476;
Pathway : NADH to ubiquinone // inferred from sequence or structural similarity /// 0008340 // determination of adult lifespan //
Interpro : light reaction // inferred from electronic annotation /// 0032981 // mitochondrial respiratory chain complex I assembly
FlyMine data for FBgn0030718.
BDGP gene expression has embryonic in situ data for CG9172: 14 pix of staining in 12 body parts.
Homophila reports that CG9172 is a close match (1e-65) to human gene NDUFS7;PSST (NP_077718), a gene associated with Leigh syndrome, 256000 (3).
VDRC has 4 RNAi stocks for FBgn0030718 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1066 ± 20	4 of 4	1.10	None
Head	1316 ± 40	4 of 4	1.30	Up
Eye	1877 ± 46	4 of 4	1.88	Up
Thoracicoabdominal ganglion	1344 ± 26	4 of 4	1.30	Up
Salivary gland	1035 ± 32	4 of 4	1.04	None
Crop	939 ± 17	4 of 4	0.90	None
Midgut	1087 ± 20	4 of 4	1.10	None
Tubule	1064 ± 50	4 of 4	1.10	None
Hindgut	1560 ± 17	4 of 4	1.60	Up
Heart	1526 ± 32	4 of 4	1.53	Up
Fat body	1198 ± 91	4 of 4	1.20	Up
Ovary	466 ± 4	4 of 4	0.50	Down
Testis	149 ± 2	4 of 4	0.10	Down
Male accessory glands	601 ± 13	4 of 4	0.60	Down
Virgin spermatheca	952 ± 62	4 of 4	0.96	None
Mated spermatheca	865 ± 18	4 of 4	0.87	None
Adult carcass	2425 ± 52	4 of 4	2.40	Up
Larval CNS	592 ± 37	4 of 4	0.59	Down
Larval Salivary gland	715 ± 34	4 of 4	0.72	Down
Larval midgut	724 ± 30	4 of 4	0.73	Down
Larval tubule	626 ± 47	4 of 4	0.60	Down
Larval hindgut	932 ± 52	4 of 4	0.94	None
Larval fat body	358 ± 34	4 of 4	0.40	Down
Larval trachea	781 ± 60	4 of 4	0.78	Down
Larval carcass	898 ± 30	4 of 4	0.90	None
S2 cells (growing)	816 ± 16	4 of 4	0.82	None
Whole fly	996 ± 62	4 of 4

Looking for FBgn0036666. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720