Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036677 through 18771 annotations produced 2 hits



(CG13023):

Annotation Number : CG13023
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036677
Gbrowse : chr3L:16917792-16919084 (-) // 100.0 //
Probeset : 1633627_at
Accessions : protein= NP_648935;, nucleotide= NM_140678;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036677.
BioGrid reports that CG13023 interacts with CG13868 CG5020 .
VDRC has 1 RNAi stocks for FBgn0036677 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.80None
Head0 ± 00 of 4 1.50None
Eye2 ± 10 of 4 6.29None
Thoracicoabdominal ganglion0 ± 00 of 4 1.20None
Salivary gland2 ± 00 of 4 5.88Up
Crop0 ± 00 of 4 1.40None
Midgut0 ± 00 of 4 1.50None
Tubule1 ± 00 of 4 2.70Up
Hindgut0 ± 00 of 4 1.20None
Heart0 ± 00 of 4 1.24None
Fat body2 ± 20 of 4 4.65None
Ovary0 ± 00 of 4 0.60Down
Testis0 ± 00 of 4 1.30None
Male accessory glands1 ± 00 of 4 2.50None
Virgin spermatheca0 ± 00 of 4 1.47None
Mated spermatheca1 ± 00 of 4 3.12None
Adult carcass1 ± 00 of 4 3.70None
Larval CNS8 ± 21 of 420.88Up
Larval Salivary gland0 ± 00 of 4 1.88None
Larval midgut1 ± 00 of 4 3.59None
Larval tubule0 ± 00 of 4 1.50None
Larval hindgut0 ± 00 of 4 1.35None
Larval fat body1 ± 00 of 4 2.40None
Larval trachea0 ± 00 of 4 1.59None
Larval carcass1 ± 00 of 4 2.41Up
S2 cells (growing)0 ± 00 of 4 1.53None
Whole fly0 ± 00 of 4



(CG13023):

Annotation Number : HDC10591
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036677
Gbrowse : chr3L:16920453-16921009 (-) // 100.0 //
Probeset : 1625056_at
Accessions : protein= NP_648935;, nucleotide= NM_140678;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036677.
VDRC has 1 RNAi stocks for FBgn0036677 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 1.40None
Head1 ± 10 of 4 3.70None
Eye0 ± 00 of 4 2.00None
Thoracicoabdominal ganglion1 ± 00 of 4 2.30None
Salivary gland4 ± 10 of 4 9.42None
Crop1 ± 00 of 4 3.50None
Midgut1 ± 00 of 4 4.10None
Tubule0 ± 00 of 4 1.50None
Hindgut1 ± 00 of 4 2.20None
Heart0 ± 00 of 4 0.79None
Fat body0 ± 00 of 4 1.53None
Ovary1 ± 10 of 4 2.90None
Testis0 ± 00 of 4 1.70None
Male accessory glands0 ± 00 of 4 1.60None
Virgin spermatheca0 ± 00 of 4 0.53None
Mated spermatheca0 ± 00 of 4 1.42None
Adult carcass0 ± 00 of 4 1.40None
Larval CNS0 ± 00 of 4 0.84None
Larval Salivary gland0 ± 00 of 4 1.37None
Larval midgut0 ± 00 of 4 1.11None
Larval tubule0 ± 00 of 4 1.10None
Larval hindgut0 ± 00 of 4 1.58None
Larval fat body0 ± 00 of 4 1.90None
Larval trachea0 ± 00 of 4 0.79None
Larval carcass0 ± 00 of 4 0.95None
S2 cells (growing)0 ± 00 of 4 0.79None
Whole fly0 ± 00 of 4

Looking for FBgn0036677. 2 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime