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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036709 through 18771 annotations produced 1 hits



Odorant receptor 74a (Or74a):

Annotation Number : CG13726
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036709
Gbrowse : chr3L:17320832-17322269 (-) // 100.0 //
Probeset : 1638129_at
Accessions : protein= NP_524123;, nucleotide= NM_079399;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0036709.
BioGrid reports that CG13726 interacts with CG17186 .
VDRC has 2 RNAi stocks for FBgn0036709 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 00 of 4 1.30None
Head6 ± 20 of 4 1.70None
Eye5 ± 10 of 4 1.46None
Thoracicoabdominal ganglion5 ± 20 of 4 1.40None
Salivary gland10 ± 50 of 4 2.69None
Crop4 ± 00 of 4 1.10None
Midgut6 ± 20 of 4 1.60None
Tubule5 ± 00 of 4 1.60Up
Hindgut4 ± 10 of 4 1.20None
Heart5 ± 00 of 4 1.41None
Fat body11 ± 31 of 4 2.88Up
Ovary4 ± 10 of 4 1.10None
Testis5 ± 11 of 4 1.40None
Male accessory glands8 ± 20 of 4 2.30None
Virgin spermatheca7 ± 10 of 4 2.07None
Mated spermatheca5 ± 20 of 4 1.51None
Adult carcass10 ± 30 of 4 2.80None
Larval CNS6 ± 10 of 4 1.71None
Larval Salivary gland9 ± 20 of 4 2.48None
Larval midgut5 ± 20 of 4 1.46None
Larval tubule5 ± 10 of 4 1.30None
Larval hindgut6 ± 10 of 4 1.67None
Larval fat body11 ± 10 of 4 3.10Up
Larval trachea5 ± 20 of 4 1.31None
Larval carcass11 ± 30 of 4 2.98None
S2 cells (growing)8 ± 10 of 4 2.14None
Whole fly3 ± 10 of 4

Looking for FBgn0036709. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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