Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036717 through 18771 annotations produced 1 hits



(CG13731):

Annotation Number : CG13731
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036717
Gbrowse : chr3L:17377120-17382998 (-) // 100.0 //
Probeset : 1636637_x_at
Accessions : protein= NP_730262;, nucleotide= NM_168725;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036717.
BioGrid reports that CG13731 interacts with CG14153 CG17377 CG17666 CG17870 CG1921 CG2261 CG3858 CG5099 CG5422 CG7173 CG9465 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 10 of 4 0.30Down
Head7 ± 20 of 4 0.50None
Eye9 ± 30 of 4 0.59None
Thoracicoabdominal ganglion10 ± 50 of 4 0.70None
Salivary gland11 ± 10 of 4 0.74None
Crop21 ± 50 of 4 1.40None
Midgut12 ± 20 of 4 0.80None
Tubule7 ± 10 of 4 0.50Down
Hindgut9 ± 00 of 4 0.60None
Heart4 ± 20 of 4 0.28Down
Fat body16 ± 140 of 4 1.07None
Ovary10 ± 30 of 4 0.70None
Testis2 ± 00 of 4 0.10Down
Male accessory glands37 ± 120 of 4 2.40None
Virgin spermatheca6 ± 00 of 4 0.41None
Mated spermatheca5 ± 00 of 4 0.35Down
Adult carcass7 ± 10 of 4 0.50None
Larval CNS11 ± 50 of 4 0.73None
Larval Salivary gland27 ± 70 of 4 1.75None
Larval midgut10 ± 00 of 4 0.67None
Larval tubule9 ± 10 of 4 0.60None
Larval hindgut209 ± 214 of 413.22Up
Larval fat body5 ± 00 of 4 0.30Down
Larval trachea197 ± 644 of 412.53Up
Larval carcass3308 ± 2564 of 4209.43Up
S2 cells (growing)7 ± 10 of 4 0.47None
Whole fly15 ± 30 of 4

Looking for FBgn0036717. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime