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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036732 through 18771 annotations produced 1 hits



Organic anion transporting polypeptide 74D (Oatp74D):

Annotation Number : CG7571
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036732
Gbrowse : chr3L:17480238-17504793 (+) // 100.0 //
Probeset : 1625041_at
Accessions : protein= NP_001163460; /// NP_648989;, nucleotide= NM_001169989; /// NM_140732;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0005515 // protein binding // inferred from p
FlyMine data for FBgn0036732.
BDGP gene expression has embryonic in situ data for CG7571: 20 pix of staining in 7 body parts.
BioGrid reports that CG7571 interacts with CG9342 .
VDRC has 1 RNAi stocks for FBgn0036732 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain124 ± 14 of 4 2.10Up
Head145 ± 84 of 4 2.40Up
Eye59 ± 104 of 4 0.99None
Thoracicoabdominal ganglion69 ± 34 of 4 1.20None
Salivary gland9 ± 20 of 4 0.16Down
Crop37 ± 24 of 4 0.60Down
Midgut15 ± 04 of 4 0.30Down
Tubule106 ± 124 of 4 1.80Up
Hindgut32 ± 14 of 4 0.50Down
Heart244 ± 184 of 4 4.07Up
Fat body496 ± 604 of 4 8.28Up
Ovary13 ± 04 of 4 0.20Down
Testis9 ± 14 of 4 0.20Down
Male accessory glands10 ± 31 of 4 0.20Down
Virgin spermatheca340 ± 104 of 4 5.67Up
Mated spermatheca327 ± 184 of 4 5.47Up
Adult carcass202 ± 114 of 4 3.40Up
Larval CNS762 ± 1024 of 412.72Up
Larval Salivary gland495 ± 174 of 4 8.27Up
Larval midgut421 ± 534 of 4 7.03Up
Larval tubule360 ± 104 of 4 6.00Up
Larval hindgut409 ± 194 of 4 6.84Up
Larval fat body370 ± 204 of 4 6.20Up
Larval trachea565 ± 444 of 4 9.42Up
Larval carcass464 ± 224 of 4 7.76Up
S2 cells (growing)186 ± 104 of 4 3.11Up
Whole fly60 ± 54 of 4

Looking for FBgn0036732. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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