FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036733 through 18771 annotations produced 1 hits

U4-U6 small nuclear riboprotein factor 60K (U4-U6-60K):

Annotation Number : CG6322
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036733
Gbrowse : chr3L:17504954-17507011 (-) // 100.0 //
Probeset : 1639280_at
Accessions : protein= NP_648990;, nucleotide= NM_140733;
Pathway : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred from sequence or structural similarity /// 0008380 // RNA splicing // inferred from sequenc
FlyMine data for FBgn0036733.
BDGP gene expression has embryonic in situ data for CG6322: 11 pix of staining in 1 body parts.
Homophila reports that CG6322 is a close match (1e-13) to human gene CFEOM1;FEOM1;KIAA1708;KIF21A (NP_060111), a gene associated with Fibrosis of extraocular muscles, congenital, 1, 135700 (3).
BioGrid reports that CG6322 interacts with CG7173 .
VDRC has 2 RNAi stocks for FBgn0036733 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	204 ± 4	4 of 4	1.60	Up
Head	72 ± 5	4 of 4	0.60	Down
Eye	60 ± 1	4 of 4	0.48	Down
Thoracicoabdominal ganglion	151 ± 8	4 of 4	1.20	Up
Salivary gland	55 ± 6	4 of 4	0.44	Down
Crop	56 ± 2	4 of 4	0.40	Down
Midgut	46 ± 1	4 of 4	0.40	Down
Tubule	51 ± 4	4 of 4	0.40	Down
Hindgut	46 ± 1	4 of 4	0.40	Down
Heart	30 ± 1	4 of 4	0.24	Down
Fat body	42 ± 3	4 of 4	0.34	Down
Ovary	317 ± 8	4 of 4	2.50	Up
Testis	55 ± 1	4 of 4	0.40	Down
Male accessory glands	47 ± 4	4 of 4	0.40	Down
Virgin spermatheca	46 ± 1	4 of 4	0.37	Down
Mated spermatheca	52 ± 2	4 of 4	0.41	Down
Adult carcass	47 ± 4	4 of 4	0.40	Down
Larval CNS	352 ± 31	4 of 4	2.79	Up
Larval Salivary gland	137 ± 6	4 of 4	1.09	None
Larval midgut	41 ± 1	4 of 4	0.33	Down
Larval tubule	94 ± 2	4 of 4	0.80	Down
Larval hindgut	73 ± 3	4 of 4	0.58	Down
Larval fat body	62 ± 1	4 of 4	0.50	Down
Larval trachea	77 ± 3	4 of 4	0.61	Down
Larval carcass	63 ± 2	4 of 4	0.50	Down
S2 cells (growing)	153 ± 2	4 of 4	1.22	Up
Whole fly	126 ± 5	4 of 4

Looking for FBgn0036733. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720