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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036742 through 18771 annotations produced 1 hits



chr3L:17626548-17631040 (+) // 100.0 // ():

Annotation Number : CG7497
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1637097_at
Accessions : protein= , nucleotide= NP_648999;
Pathway : 0006468 // protein phosphorylation // non-traceable author statement /// 0007015 // actin filament organization // infer
Interpro : 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred f
FlyMine data for full length.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain40 14 of 4 0.80None
Head118 44 of 4 2.50Up
Eye29 34 of 4 0.62Down
Thoracicoabdominal ganglion44 04 of 4 0.90None
Salivary gland75 74 of 4 1.58Up
Crop358 134 of 4 7.50Up
Midgut170 114 of 4 3.60Up
Tubule71 64 of 4 1.50Up
Hindgut402 134 of 4 8.50Up
Heart94 44 of 4 1.99Up
Fat body94 74 of 4 1.99Up
Ovary17 14 of 4 0.40Down
Testis69 14 of 4 1.50Up
Male accessory glands54 34 of 4 1.10None
Virgin spermatheca117 34 of 4 2.46Up
Mated spermatheca116 54 of 4 2.46Up
Adult carcass142 94 of 4 3.00Up
Larval CNS49 64 of 4 1.05None
Larval Salivary gland8 21 of 4 0.18Down
Larval midgut124 74 of 4 2.61Up
Larval tubule38 14 of 4 0.80None
Larval hindgut87 44 of 4 1.83Up
Larval fat body14 31 of 4 0.30Down
Larval trachea821 1924 of 417.26Up
Larval carcass107 114 of 4 2.26Up
S2 cells (growing)6 01 of 4 0.15Down
Whole fly47 44 of 4

Looking for FBgn0036742. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime