Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036746 through 18771 annotations produced 1 hits



TORC (TORC):

Annotation Number : CG6064
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036746
Gbrowse : chr3L:17654727-17657719 (-) // 100.0 //
Probeset : 1624928_at
Accessions : protein= NP_649001;, nucleotide= NM_140744;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay
FlyMine data for FBgn0036746.
BDGP gene expression has embryonic in situ data for CG6064: 4 pix of staining in 1 body parts.
TRiP has 2 RNAi stocks for FBgn0036746 available for purchase.
VDRC has 2 RNAi stocks for FBgn0036746 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain337 ± 174 of 4 3.10Up
Head120 ± 94 of 4 1.10None
Eye115 ± 74 of 4 1.06None
Thoracicoabdominal ganglion267 ± 44 of 4 2.50Up
Salivary gland281 ± 294 of 4 2.58Up
Crop193 ± 74 of 4 1.80Up
Midgut108 ± 34 of 4 1.00None
Tubule179 ± 104 of 4 1.60Up
Hindgut169 ± 44 of 4 1.60Up
Heart146 ± 84 of 4 1.35Up
Fat body181 ± 374 of 4 1.67Up
Ovary189 ± 74 of 4 1.70Up
Testis59 ± 44 of 4 0.50Down
Male accessory glands236 ± 104 of 4 2.20Up
Virgin spermatheca177 ± 64 of 4 1.63Up
Mated spermatheca153 ± 74 of 4 1.41Up
Adult carcass154 ± 194 of 4 1.40None
Larval CNS211 ± 104 of 4 1.94Up
Larval Salivary gland181 ± 104 of 4 1.67Up
Larval midgut109 ± 64 of 4 1.01None
Larval tubule158 ± 14 of 4 1.50Up
Larval hindgut161 ± 64 of 4 1.48Up
Larval fat body130 ± 94 of 4 1.20None
Larval trachea137 ± 84 of 4 1.26Up
Larval carcass152 ± 94 of 4 1.40Up
S2 cells (growing)177 ± 44 of 4 1.63Up
Whole fly109 ± 54 of 4

Looking for FBgn0036746. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime